Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0486 ATGGCTACCCAACACAATATCAATGGCAACAACTTCGAAGGGAATGGGATTGCACTTGCTACCCAGTTGGAATTGGAGCTTGACCCAAATTTGATTGGGGCTAACTGGGTTGAAGAGTGTGAAAAGGTTGGGTCTTTTGATGTGGGTTACCCTATTGAAGAAGCGGTAGAGAAAATCAGTTTAGTTGATGGGTCTCAAACTTGTGTTACAACAACTCATGGGAATGGTAACAAAGATGAGACTAAAGATGAGAGTAAAGATGAGATTAAAGATGAGAGTAAAGATAAGATTAAAGATGAGATTAAAGATGAAAATAAATCTGAGTCTGAATCTGATTCTGAAAGTGAAAGTGAAGATTCAAGTTCTGAAGAAAGCAGTAGAAGTAGTAGCAGCAGTGACAGTGACAGTGACAGTGACAGTGACAGTGATAGTGATAGTGATGAAGATGATAAGAAAAACAAAGGGGATGTTGAAGAAGGTGAGATTGAAGGTTCTGAGGATGAGGATGACGATGATGATAGCAAAGGCGGGGATAAGATGGTTACTTGTGGCTTGGATGATGATGATATTGATGTTCTTGAATTTGATGAAGATGATGGTGCAAAAGGAGAACCTATCAGGTCAAAAAATGAGCTTGAGAATCTGCCTCCAGTTCCTCCAGTCGAGGTGACCTTAGAGCCACACCATCAAGTGCAGCCTGTGGGAGTTGTTATGTCGATTGTTGGTGCTCAAGTTATTGTGGAAGGAGTAGAAAAGCACGAGCCTCTAAATGAGGGTTCTATTCTCTGGATGACTGAAAACCGAAAACCACTAGGGTTAGTTGATGAAATCTTTGGACCAGTCAAAACCCCTTACTATATAGTGAGATACAATTCTGAAAGTGAAGTTCCCGAGGGTATCCACGCTGGAACTTTGATCTCATTCGTTCCAGAATTTGCAGATTATGTGCTTAATAACAAGGATGTTTATAAGAAAGGGTACGATGCATCTGGTGCGAATGATGAAGAGTTGTCTGATGAATATGAGTTTTCAGATGACGAGAAAGAGGCAGAGTACAGGAGAATGCAAAGAACAGCGAAGAGAGACAAAACTGATCAAAATCAGGGCCAGAGAAAAATCAATAGAAAGAAATCTTCACCCAAACAGAATGTTGCCCCTTCCATCTCTGGTACACCTGCACCGACATTGCCTGTTCATGGAAATTCTTCACCTTTTCCAGGAAATTTGCAAAGACATTTTGGGGGACCTACTATGGCTCCACCGTTCCGGATTCCACCCTCAAATGCAGGTCCTAACTTTGCAACAAATGGAGTTTGGACAAATGGGACAACACTCCCACAGCAGCCACAGTCTGCTCTGCCTCCTAATGCATTTCCTAACAATGGCATCCCATGGTACCCACAAAACACTCAAATTCCTCATCAGTTGTCTGGGCCAGGAATGCAATTTCAACAGCAGTTACATCCCAATCAGGGACCTTTTTTGCAAGCCATGTTTCCTGGGATACTTCCCAATATGTTTGCACAGCCCATGAATGCACTGGGGCTTGTTGGTCAAAACCAAATGCAGTTTGGGTTGAACACACCCTTTCAACAGGTTCAGCGACCTGTATTTTCTGCACAACAGGGTTTCCCATCTGGTGAATTGCAGTCTCAAGGAAACCTTAATTTGCCTTCCTGTACTATTCCAGGTCCCCCACCTCAATTTCGTCCTAACGCATCTTCTAATCGTGGTAGTCGTGGGGGGAGAACATTTCGTGGAGCGGGTAGAAAAGGGTGGCGACCATCCAGGTGA 1794 0.4326 MATQHNINGNNFEGNGIALATQLELELDPNLIGANWVEECEKVGSFDVGYPIEEAVEKISLVDGSQTCVTTTHGNGNKDETKDESKDEIKDESKDKIKDEIKDENKSESESDSESESEDSSSEESSRSSSSSDSDSDSDSDSDSDSDEDDKKNKGDVEEGEIEGSEDEDDDDDSKGGDKMVTCGLDDDDIDVLEFDEDDGAKGEPIRSKNELENLPPVPPVEVTLEPHHQVQPVGVVMSIVGAQVIVEGVEKHEPLNEGSILWMTENRKPLGLVDEIFGPVKTPYYIVRYNSESEVPEGIHAGTLISFVPEFADYVLNNKDVYKKGYDASGANDEELSDEYEFSDDEKEAEYRRMQRTAKRDKTDQNQGQRKINRKKSSPKQNVAPSISGTPAPTLPVHGNSSPFPGNLQRHFGGPTMAPPFRIPPSNAGPNFATNGVWTNGTTLPQQPQSALPPNAFPNNGIPWYPQNTQIPHQLSGPGMQFQQQLHPNQGPFLQAMFPGILPNMFAQPMNALGLVGQNQMQFGLNTPFQQVQRPVFSAQQGFPSGELQSQGNLNLPSCTIPGPPPQFRPNASSNRGSRGGRTFRGAGRKGWRPSR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0486 597 MobiDBLite consensus disorder prediction 545 597 - -
Lan13g0486 597 MobiDBLite consensus disorder prediction 379 408 - -
Lan13g0486 597 MobiDBLite consensus disorder prediction 545 559 - -
Lan13g0486 597 MobiDBLite consensus disorder prediction 76 109 - -
Lan13g0486 597 MobiDBLite consensus disorder prediction 347 372 - -
Lan13g0486 597 Gene3D Probable tRNA pseudouridine synthase domain 204 309 IPR038664 -
Lan13g0486 597 MobiDBLite consensus disorder prediction 160 174 - -
Lan13g0486 597 MobiDBLite consensus disorder prediction 67 189 - -
Lan13g0486 597 Pfam Gar1/Naf1 RNA binding region 231 315 IPR007504 GO:0001522|GO:0042254
Lan13g0486 597 SUPERFAMILY Translation proteins 231 294 IPR009000 -
Lan13g0486 597 MobiDBLite consensus disorder prediction 327 415 - -
Lan13g0486 597 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 48 591 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0486 Lan-Chr13 3594003 3597227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0486 K14763 - gmx:102660668 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0464 7 3396915 3399285 Lan13g0486 13 3594003 3597227 LSH