Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0444 ATGGAAACAAGATCTTCAAAACGCAGAAGAATTGCTCAAATATTAGAGAATGAAGCTAATTCAGCCATTGATCGAATCAGCGATCTCCCTGATGATGTTCTTCATCAAATTCTTTTCCTCGTTCCGATCAAATGTGTGGCACAAATGAGTGTTCTTTCAAAAAGATGGAAACTTCTTTGGTCCACATTCCCAGACCTTGACTTCACAACCCTCAACCCGTTTGATATTTCTTCAAAAAATCTTAAATTTTCAAACCACGAGAAACAAAAGAATCATTCTTTGGATTCAACACCAATGGATTTCATCACCCAAGTTCTTTCTGTTCGCGACAAGCACTCAGACATTAGGGTTCTTTGTTTTCGTGGCGGTTTAGGTTTTTCGCGGCTAAACAGTTTATTTCGTAGTGCCATTAAGCATAATGTTAGAGAACTAGACATTGAAGTCACCACTTCTGTGACCAAAGATGATTATTTCAACTTTCCAAGATGTGTTATAGGGAGTGAATCTTTAAGGGTCTTGAAATTAAAATCGGGTTTTCGTTTGCCTCCATCATCTATTATGAGAGATGGGTTTCAATCTCTACACACATTGTCTCTTTCACTAGTGATTTTGTATAATCAGCCTTATCTATCTGATTTGTTCTCTGAATCATCATTTCCTCTTTTGAAAAATTTGCACTTAGATATGTGCTTTGGATTGAAATATCTCCATGTTGGTTGTCGGGGTCTTAAAGATTTGAGCTTAGACAAATGTTTTCAGCTACATGGTTTGGATATCTCATGTGCAAAACTAGAAAAAATGAGAGTAACAAGTTCTTTTGATGCCTATAGTAAAAAGAGCTGGGTAAGAATCAATGCACCAAAGCTTGAACATTTGTTTTGGCAACATAATGCTGTCAGTGACACCACTGTTTTTGAGCAATCAAATTTCTTACGTGAGGCATACGTTGGTTTCTTTGCAATGAAAGGAGCTATTGGTATGGATAAGGTTCATAGTGTCAATAGTTTCTTATCTGGACTATCTCATGCTGGTTCCATGGTTCTTGAAAGTCAAACTATTGAGATTCTATCAAACAAAAACTTCTTTATTCCGCCATTTCGAAATCTTAAATCATTAGAGCTGAATATTGGTTTCAGCAAAAGTAATGTCCGGGGACTAGCATGCCTGTTCAGGAGTTCTCTTATGCTCCACACCCTGATTATGAAGATCATTAAAGATTATAAGATTGAAAAAAAACAATGGAATAGTGGGTTATGGGACATGACTAGCATTGAGGAAGAGCAGTATTGGGAATCTCAGATCCCAAGTCTAATGTCTTTCCTGGAACACTTGAAAGTGGTGAAAATCCATAGATTTTTTGAATGTGAGAGTGAAGTTACACTTGCAATGTTTCTTCTCAAGCATGGGAAGGCCTTAGAAGAAATGATATTATGTGCAGGACGATGCAATGGAGATACACTAAGAAGACAAAAAATAAGGTCACAAATGATGGGATTTTCTTGGGCTTCTTCTAATGTAAAACTAGCATTTCATTAG 1536 0.3672 METRSSKRRRIAQILENEANSAIDRISDLPDDVLHQILFLVPIKCVAQMSVLSKRWKLLWSTFPDLDFTTLNPFDISSKNLKFSNHEKQKNHSLDSTPMDFITQVLSVRDKHSDIRVLCFRGGLGFSRLNSLFRSAIKHNVRELDIEVTTSVTKDDYFNFPRCVIGSESLRVLKLKSGFRLPPSSIMRDGFQSLHTLSLSLVILYNQPYLSDLFSESSFPLLKNLHLDMCFGLKYLHVGCRGLKDLSLDKCFQLHGLDISCAKLEKMRVTSSFDAYSKKSWVRINAPKLEHLFWQHNAVSDTTVFEQSNFLREAYVGFFAMKGAIGMDKVHSVNSFLSGLSHAGSMVLESQTIEILSNKNFFIPPFRNLKSLELNIGFSKSNVRGLACLFRSSLMLHTLIMKIIKDYKIEKKQWNSGLWDMTSIEEEQYWESQIPSLMSFLEHLKVVKIHRFFECESEVTLAMFLLKHGKALEEMILCAGRCNGDTLRRQKIRSQMMGFSWASSNVKLAFH* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0444 511 SUPERFAMILY RNI-like 115 303 - -
Lan7g0444 511 PANTHER F-BOX PROTEIN-LIKE 20 457 - -
Lan7g0444 511 Pfam FBD 440 477 IPR006566 -
Lan7g0444 511 Pfam F-box domain 26 60 IPR001810 GO:0005515
Lan7g0444 511 Gene3D Ribonuclease Inhibitor 20 309 IPR032675 -
Lan7g0444 511 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 20 457 - -
Lan7g0444 511 SMART 9598neu4hmm 438 511 IPR006566 -
Lan7g0444 511 ProSiteProfiles F-box domain profile. 23 71 IPR001810 GO:0005515
Lan7g0444 511 SUPERFAMILY F-box domain 19 75 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0444 Lan-Chr7 3223206 3225803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0444 24 458 EF-hand Containing Proteins AT5G41840 24.843 1.39e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0444 - - ahf:114927451 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0444 7 3223206 3225803 Lan8g1522 8 22248254 22250858 LSH