Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0422 ATGAGTTATCCAAATCCCATGTTGTCCACCCTTCTCAAAACAGCACCAAGCTTTATTACCACTCCAAAAGCCATGGTCATATACCTTTCTCCCTCTCCACCTTCACATTCTAGTTCCATCATCAAATTGACAAATTCAAAGTCACCCATTTCAGCACCTTCCTTCAAGCTCAAAACCCATTTCTCAAAATCACTTTTTTCTCCTTCGTTTGCTTCCCCAAACTTGAACTTCACCACCAAGAAACAGTTTTTACATGGCAACAATAATAGTAGATGCAAACATGCAAAAAGATTTGATTTTAGGACATGGGCTATTGGTGGATTTGATTATGGGAACTTTGAGGGTGCTCAGTCTGTGGTTGAAGCTGTTGCAGTTTTAACAGCAATCATTGTTGTTCATGAGAGTGGTCATTTCCTTGCTGCTTATCTCCAAGGAATCCATGTGAGTAAATTTGCAGTTGGGTTTGGTCCAATTTTAGCTAAGTTCAATGCAAACAATGTAGAATATTCCATTAGAGCTTTTCCTCTTGGTGGATTTGTTGGCTTTCCTGATAACGATCCAGATAGTGATATTCCTGTTGATGATAAAAACTTACTTAAGAACAGACCAATATTAGATAGAGTCATTGTGGTTTCAGCTGGTGTTATAGCTAATATCATTTTTGCAATTGTAATTGTCTTTGTTCAAGTCATTGCTGTTGGTTTGCCTGTGCAAGAGGTTTTTCCTGGTGTGATTGTTCCTGAAGTTAAGCCTTTTTCAGCTGCTTCAAGAGATGGTTTGCTTCCTGGTGATGTGATCCTTGAGGTCAATGGGAATGAGTTTCCAAAACCAGGTCCCAATGCTGTTTCGGAAGTCGTCGATGTTATTAAGAAGAACCCTAAGAGATATGTTTTGCTTAAGGTTAAGAGGGGGGAGCAGAACTTTGAAATAGGAGTCACCCCTGATGAGAGTTATGATGGAACTGGTAAAATTGGAGTTCAGCTATCACCAAATTTGAAGTTAGGTAAGGTTAGGCCAAAGAATATTGTGGAAGCTATAAACTTTACCGGAAAAGAATTTTGGGGTCTGTCATCTAATGTTTTAGATGGCTTAAAACAGGCCTTTCTAAACTTCTCTCAGACAGCTAGTAAGGTTTCTGGCCCTGTAGCTATTATTGCTGTTGGTGCGGAAGTTGCACGATCAAACACGGATGGTCTCTACCAATTTGCCGCCATACTCAATATTAACCTTGCAGTTATAAACCTTCTTCCTTTACCTGCATTAGATGGGGGCACATTGGCACTGATCCTCATTGAGGCTGCCAGAGGTGGGAGAAAGCTGCCTCTTGAAGTGGAGCAACAGATCATGTCATCGGGAATTATGCTTGTTCTACTTCTGGGGTTATTCCTTATTGTCCGCGACACCTTAAACCTTGATTTTATCAAAGAGATATTGTAA 1437 0.4022 MSYPNPMLSTLLKTAPSFITTPKAMVIYLSPSPPSHSSSIIKLTNSKSPISAPSFKLKTHFSKSLFSPSFASPNLNFTTKKQFLHGNNNSRCKHAKRFDFRTWAIGGFDYGNFEGAQSVVEAVAVLTAIIVVHESGHFLAAYLQGIHVSKFAVGFGPILAKFNANNVEYSIRAFPLGGFVGFPDNDPDSDIPVDDKNLLKNRPILDRVIVVSAGVIANIIFAIVIVFVQVIAVGLPVQEVFPGVIVPEVKPFSAASRDGLLPGDVILEVNGNEFPKPGPNAVSEVVDVIKKNPKRYVLLKVKRGEQNFEIGVTPDESYDGTGKIGVQLSPNLKLGKVRPKNIVEAINFTGKEFWGLSSNVLDGLKQAFLNFSQTASKVSGPVAIIAVGAEVARSNTDGLYQFAAILNINLAVINLLPLPALDGGTLALILIEAARGGRKLPLEVEQQIMSSGIMLVLLLGLFLIVRDTLNLDFIKEIL* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0422 478 PANTHER MEMBRANE METALLOPROTEASE ARASP2, CHLOROPLASTIC-RELATED 51 478 - -
Lan7g0422 478 Pfam PDZ domain 246 303 IPR041489 -
Lan7g0422 478 ProSiteProfiles PDZ domain profile. 233 304 IPR001478 GO:0005515
Lan7g0422 478 CDD PDZ_metalloprotease 231 314 - -
Lan7g0422 478 Pfam Peptidase family M50 123 459 IPR008915 GO:0004222|GO:0006508
Lan7g0422 478 PANTHER REGULATOR OF SIGMA-E PROTEASE RSEP 51 478 IPR004387 GO:0004222|GO:0006508|GO:0016021
Lan7g0422 478 Gene3D - 236 329 IPR036034 GO:0005515
Lan7g0422 478 SUPERFAMILY PDZ domain-like 203 306 IPR036034 GO:0005515
Lan7g0422 478 CDD S2P-M50_PDZ_RseP-like 119 235 - -
Lan7g0422 478 SMART pdz_new 231 305 IPR001478 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0422 Lan-Chr7 2979397 2981180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0422 - - lang:109351773 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0422 7 2979397 2981180 Lan8g1553 8 22558506 22560261 LSH