Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0387 ATGGAAGAGCCAAATTCAAAACCTGTCTTGATCAGAGAAGTGTGGGCTAACAATCTTGAATCTGAATTCAGTCTCATCCGTCAACTCATCGGTCAATATCCGTTTGTATCCATGGATACTGAGTTTCCTGGTGTTATTTTTAGCCAACATGTTCTCACAAAAACTTATCAACACCAGAACCTGCATCCCTTGGATGAATACCGCCTTCTAAAAGCGAACGTTGACGAACTCAACCTCATCCAAGTTGGCCTCACTCTTTCTGACGCACGTGGCAAACTCCCTGACCTTGGAACCAACAACTGCTTTATCTGGCAATTCAACTTCTGCGACTTCGATGTGGTGCGTGACAAACACGCTCCTGATTCAATTGCTCTCCTCCGTAGACAAGGTATTGATTTCGAGCGCAATGTTGTGGACGGTGTTGACTCTGCACGCTTTGCTGCAATGATGCTTTCTTCTGGGCTCCTCTACAATAAGGCTGTGACTTGGGTCACGTTCCACAGTGCCCATGATTTTGGGTATCTGGTGAAAATTTTGACACAAAGGAAGTTACCGACTAGGTTGGATGAGTTCTTATGGACAGTGAGACGGATATTTGGGAACAAGGTTTATGATATTAAACATATGATCCGTTATTGTGACTCACTTTATGGTGGTTTGAATCGAGTGGCTGAAACCCTCAAAGTGTATCGGGTCGTCGGAAAATGTCATCAAGCCGGTTCAGACAGTTTATTGACTTGGTATGTATTTCAGAAGATTAGAGACACATATTTTGTGAAGGGTGGGCATAAAAAATGTTCGAGAGTGTTGTTCGGGTTAGAGTTATATGCATTTCATCAAAAGGTGGTTAATCGTGGTGGAAAAAATAGATTTTACCCACAAATGAACTTTAACTACAATATCTTGAATCCTCAGATTATCACTTTAAGGAAAGCTTTATTCTAA 945 0.418 MEEPNSKPVLIREVWANNLESEFSLIRQLIGQYPFVSMDTEFPGVIFSQHVLTKTYQHQNLHPLDEYRLLKANVDELNLIQVGLTLSDARGKLPDLGTNNCFIWQFNFCDFDVVRDKHAPDSIALLRRQGIDFERNVVDGVDSARFAAMMLSSGLLYNKAVTWVTFHSAHDFGYLVKILTQRKLPTRLDEFLWTVRRIFGNKVYDIKHMIRYCDSLYGGLNRVAETLKVYRVVGKCHQAGSDSLLTWYVFQKIRDTYFVKGGHKKCSRVLFGLELYAFHQKVVNRGGKNRFYPQMNFNYNILNPQIITLRKALF* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0387 314 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 5 276 IPR039637 GO:0004535|GO:0030014
Lan7g0387 314 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 5 276 - -
Lan7g0387 314 SUPERFAMILY Ribonuclease H-like 11 261 IPR012337 -
Lan7g0387 314 Pfam CAF1 family ribonuclease 14 141 IPR006941 -
Lan7g0387 314 Gene3D - 1 276 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0387 Lan-Chr7 2634036 2635255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0387 K12581 - qsu:112026170 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0387 7 2634036 2635255 Lan7g0387 7 2634036 2635255 ECH
Lan6g1857 6 29710382 29711352 Lan7g0387 7 2634036 2635255 PCT
Lan7g0387 7 2634036 2635255 Lan6g1857 6 29710382 29711352 PCT