Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1857 ATGTCTGTGTTGAAAGACGAACCTAATTTGAACCCGATTGTGATCCGTGAGGTTTGGGCTTCAAACCTTCAATCTGAATTCAACCTCATCCGTGACGTCATCGACCGTTATCCATTCATTTCAATGGATACGGAATTCCCCGGCGTTATTTTCCGTCCACCGCTTGGATCTTCCTTCAGCCACCTTCACCCCTCCGATCACTATAGCTTACTCAAGTCCAACGTTGATTCCCTCAACCTCATCCAGGTCGGTCTCACTCTCTCCGACGCCGACGGTAATCTACCGGATCTCGGCACCGCCGCGAACCGCTTCATATGGGAGTTCAACTTCCGTGACTTTGATGTAGCGCGTGACCCCCACGCTCCTGACTCGATCGACCTTCTTCGCCGCCAGGGGATTGACTTCTGCCGTAACGTCGACGACGGCGTTGACTCGGCGGAGTTCGCGGAGCTGATGATGTCGTCGGGGCTTGTGTGCAACGATGAGGTGAGTTGGGTAACGTTTCACAGCGCGTATGATTTCGCGTACTTGATGAAGGTTTTAACTCGACGCGCTTTGCCGAGTGGGTTGAAGGAGTTTCTGAAAATGATGAAGGTGTTTTTCGGAAACAACATATATGACATTAAACACATGACGCGGTTTTGTGAGAATACATTGTATGGCGGTTTGGACCGGGTTGCGAAAACGCTCAATGTGAACCGGGCGGTTGGAAAGTCTCATCAAGCCGGCTCTGATAGCTTGTTGACGTGGCATTCATTTCAGAAAATGAGGGACATGTATTTTCTTAACGATGGGGCCCAGAAACATGCTGGGGTATTGTTTGGATTAGAAGTATCTCTTATGTAA 846 0.4965 MSVLKDEPNLNPIVIREVWASNLQSEFNLIRDVIDRYPFISMDTEFPGVIFRPPLGSSFSHLHPSDHYSLLKSNVDSLNLIQVGLTLSDADGNLPDLGTAANRFIWEFNFRDFDVARDPHAPDSIDLLRRQGIDFCRNVDDGVDSAEFAELMMSSGLVCNDEVSWVTFHSAYDFAYLMKVLTRRALPSGLKEFLKMMKVFFGNNIYDIKHMTRFCENTLYGGLDRVAKTLNVNRAVGKSHQAGSDSLLTWHSFQKMRDMYFLNDGAQKHAGVLFGLEVSLM* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1857 281 Pfam CAF1 family ribonuclease 18 143 IPR006941 -
Lan6g1857 281 Gene3D - 4 279 IPR036397 GO:0003676
Lan6g1857 281 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 11 278 - -
Lan6g1857 281 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 278 IPR039637 GO:0004535|GO:0030014
Lan6g1857 281 SUPERFAMILY Ribonuclease H-like 14 275 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1857 Lan-Chr6 29710382 29711352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1857 K12581 - jre:108997778 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1857 6 29710382 29711352 Lan7g0387 7 2634036 2635255 PCT
Lan7g0387 7 2634036 2635255 Lan6g1857 6 29710382 29711352 PCT