Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0379 ATGGTTATGGCGCCTAGAAAACCTCGCCCCCACCGTGATATGCTCATGGATTCGGTCTTTGCGATTGTCTTTGTTCTCGTCGCTTGCGTCGAGCTCTGTGATGCTGCTACTGTCGTCGACGTTTATCGTCTCATCCAATACGACATGTCCGGTGTGCCGTTTGGTTCTCGATTGGCGAGCCTCAACCACCACGCCGCTTCTCTTCACTTCTCTCCTAACTCCGATCTCTCTCGCTCCGTTCTCCTCATTCCTCTTCGTGAACTCAACATATCTTTTGTCAAAGAATACATTTCTGAAAGCAAGCCTCTGGGGGGTTTAATATTTTTGCTGCCCCAAATGTTCAGTTTTGAAAAGAAAGGTGGTGTAGGAAGTAATCATCAAGATGAAAGCAAAGAACTACTGAAGAATGTGCTGGCTGAACTTGAACAAATATTGATACATGCTAACATACCTTATCCTGTTTATTTTGCCTTTGAGGATGACACTATTGATGCTGTGTTAACTGATATCAAGAAAAATGATGCCAGTGGTCAGCCTGCTACTGCAACTACCGGCGGATACAAATTTGTTGTTTCAGCTCCAGAACCAAAGAAAGTTGTATCTCCACCCATTTCAAACATTCAGGGATGGTTGGCAGGACTGAAGACAGATGATAGTGCTCAACAATTACCTACCATTGCGATAGTTGCATCATATGACACCTTTGGGGCTGCTCCTGCATTATCAGTGGGAAGCGATAGTAATGGAAGTGGTGCTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCTCTATTATATTCTAATCCAAAGACCAGAGGACAATATAATCTGCTGTTTGGGCTAACGTCTGGTGGGCCTTACAACTACAATGGAACTCGTAAGTGGCTTCGAAGCTTAGATCAACGTCTTCGTGAGAGTATTGATTATGCTATATGCTTAAACAGTATTGGGTCATGGGAAAATGATTTGTGGGTTCATGTGTCTAAGCCTCCAGAAAATGCCTATGTTAAGCAAATTATGGAAGATTTTTCAGGTGTCGCAGAAGAGTTGGGCTTTAAAGTGAATTTGAAGCATAAGAAAATAAATATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACTCTCTCTGAACTCCCTACTGCACCTGAATTGCTAGAAAGCACTGGTGGTTTGGTTGACAGCAGGCATTTTGTCAACGAAAAGGCAGTTATCAGAAGTGTGAAATTAATTGCTGAGAGTCTTGCGAGACATATTTATGGACATCAAGGAAAGAACATCCAAATCTTTGCGGACAACAGTAGTTTGGCTGTAAATCCTTCATATGTTCGATCATGGTTAGATCTTTTCTCCCAAACATCTCGAGTGGCACCATTTTTCTCAAAAGATGACCCTTTTGTCGCATCACTTAAAAAGGAATTAGAAGAACACACTGATGAGGTCAATGTGCATCGTGACGTGCTAGATGGGGTGTTCACTTTCTATGATTCAACAAGGGCAAAGCTTAACATTTATCAGGTTGCCAGTGTCACATTTGACTTGCTGTTACTTCTAGTATTGGGATCGTATTTGATTGTGCTCTTCAGTTTCTTGGTCATCACAACTAGGGGTCTTGATGATTTAATCAGTATATTTAGGCGGCCACCCTCTCGAAAAGTGAAAACTGCCTAA 1698 0.424 MVMAPRKPRPHRDMLMDSVFAIVFVLVACVELCDAATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPNSDLSRSVLLIPLRELNISFVKEYISESKPLGGLIFLLPQMFSFEKKGGVGSNHQDESKELLKNVLAELEQILIHANIPYPVYFAFEDDTIDAVLTDIKKNDASGQPATATTGGYKFVVSAPEPKKVVSPPISNIQGWLAGLKTDDSAQQLPTIAIVASYDTFGAAPALSVGSDSNGSGAVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSLDQRLRESIDYAICLNSIGSWENDLWVHVSKPPENAYVKQIMEDFSGVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELPTAPELLESTGGLVDSRHFVNEKAVIRSVKLIAESLARHIYGHQGKNIQIFADNSSLAVNPSYVRSWLDLFSQTSRVAPFFSKDDPFVASLKKELEEHTDEVNVHRDVLDGVFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISIFRRPPSRKVKTA* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0379 565 PANTHER NICALIN 7 564 - -
Lan7g0379 565 Gene3D Zn peptidases 107 432 - -
Lan7g0379 565 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Lan7g0379 565 ProSitePatterns EF-hand calcium-binding domain. 246 258 IPR018247 -
Lan7g0379 565 Coils Coil 476 496 - -
Lan7g0379 565 PANTHER NICALIN 7 564 IPR016574 GO:0009966|GO:0016020
Lan7g0379 565 SUPERFAMILY Zn-dependent exopeptidases 149 425 - -
Lan7g0379 565 CDD M28_nicalin_like 138 431 - -
Lan7g0379 565 PIRSF Nicalin 7 560 IPR016574 GO:0009966|GO:0016020
Lan7g0379 565 Pfam Nicastrin 226 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0379 Lan-Chr7 2582580 2590374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0379 1 563 EF-hand Containing Proteins AT3G44330 71.731 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0379 - - gmx:100778865 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0379 7 2582580 2590374 Lan7g0379 7 2582580 2590374 ECH
Lan7g0379 7 2582580 2590374 Lan13g0440 13 3188136 3203336 LSH