Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0440 ATGGCTATGGCGCCAACAAAACTTCGCCCTCATCGTGACATTCTCATGGATTCGGTGATTGCACTTGTCTTCGTCCTCGTCGCCTGCGTCGAACTCTGCGACGGCGCCACCGTCGTCGACGTCTATCGTCTCATTCAATACGACATGTCTGGTGTGCCGTTTGGATCTCGATTGGCGAGCCTCAACCATCATGCTGCTTCTCTTCACTTCTCTCCTCACTCCGATCTCTCACGCTCCGTTCTCCTCATCCCTCTTCGTGAACTCAACATGTCTTTTGTCAAAGAATATATTGCTGAAAGCAAGCCTCTGGGGGGTTTAATATTTTTGCTGCCCCAGATGTTCAATTTTGGTAAGAAAGGTGCTAGTAACCATCCAGATGGAAGCAAAGAGCTACTGAAGAATGTGTTGGCTGAACTTGAACAAATACTGATACATGCTAACTTACCTTATCCTGTTTATTTTGCCTTTGAGGATGACACTATTGATGCTGTGTTAACTGATATCAAGAAGAATGATGCCGCTGGTCAGCCTGCTACTGCAACTACTGGCGGATACAAATTTGTTGTTTCAGCTCCAGAACCAAAGAAAGTTGGATCTCCACCTGTTTCAAATATTCAGGGATGGTTGGCAGGATTGAAGACAGATGATGGCGCTCATCAATTACCCACCATTGCGATAGTGGCATCATATGACACCTTTGGGGCTGCTCCTGCATTATCAGTGGGAAGCGATAGTGGTGGAAGTGGTGCTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCTCTGTTATATTCTAATCCAAAGACAAGAGGACAATACAACCTGCTCTTTGGGCTAACGTCTGGTGGCCCTTACAACTATAATGGAACTCGTAAGTGGCTTAGAAGCTTGGATCAACGTCTTCGTGAGAGCATTGATTATGCTATATGCTTAAATAGTATTGGGTCATGGGAAAATGAATTGTGGGTTCATGTGTCTAAGCCTCCAGAAAATGCCTATATTAAACAAATTATGGAAGATTTTTCAGGTGTCGCAGAAGAGTTAGGCTTTAAAGTTAATCTGAAGCATAAGAAAATAAATATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACGGCTGCCACTCTCTCTGAGCTCTCTACTGCACCTGAATTGCTAGAAAGCACTGGTGGTTTGGTTGACAGCAGGCATTTTGTCAACGAAATGGCAATTACCAGAAGTGTGAAATTAATTGCTGAGAGTCTTGCGAGACATATTTACGGACATCAAGGAAAGAACATCCAAATCTTTGCGGACAACAGTAGTTTGGCTGTAAATCCTTCGTATGTCCGATCATGGTTAGATCTTCTGTCCCAAACATCCCGAGTGGCACCATTTTTCTCAAAAGATGACCCTTTCGTTACAGCCCTTAAAAAGGAATTAGAAGATCACACTGATGAGGTCAATGTGCAAAGTGAAGTGCTAGATGGGATGTTCACCTTCTATGATTCAACAAGGGCAAAACTTAACATATATCAGGTTGCCAGTGTGACATTTGACTTGCTGTTGCTTCTTGCGTTGGGATCGTATTTGATTGTGCTTTTCAGTTTCTTGGTCATCACAACTAGGGGTCTTGATGATTTAATCAGTATATTTCGGCGCCCACCCTCTCGAAAAGTGAAGACTGCCTAA 1692 0.4362 MAMAPTKLRPHRDILMDSVIALVFVLVACVELCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHSDLSRSVLLIPLRELNMSFVKEYIAESKPLGGLIFLLPQMFNFGKKGASNHPDGSKELLKNVLAELEQILIHANLPYPVYFAFEDDTIDAVLTDIKKNDAAGQPATATTGGYKFVVSAPEPKKVGSPPVSNIQGWLAGLKTDDGAHQLPTIAIVASYDTFGAAPALSVGSDSGGSGAVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSLDQRLRESIDYAICLNSIGSWENELWVHVSKPPENAYIKQIMEDFSGVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPELLESTGGLVDSRHFVNEMAITRSVKLIAESLARHIYGHQGKNIQIFADNSSLAVNPSYVRSWLDLLSQTSRVAPFFSKDDPFVTALKKELEDHTDEVNVQSEVLDGMFTFYDSTRAKLNIYQVASVTFDLLLLLALGSYLIVLFSFLVITTRGLDDLISIFRRPPSRKVKTA* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0440 563 Pfam Nicastrin 224 361 - -
Lan13g0440 563 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Lan13g0440 563 Gene3D Zn peptidases 149 388 - -
Lan13g0440 563 PANTHER NICALIN 7 562 IPR016574 GO:0009966|GO:0016020
Lan13g0440 563 PANTHER NICALIN 7 562 - -
Lan13g0440 563 PIRSF Nicalin 4 558 IPR016574 GO:0009966|GO:0016020
Lan13g0440 563 CDD M28_nicalin_like 136 429 - -
Lan13g0440 563 SUPERFAMILY Zn-dependent exopeptidases 188 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0440 Lan-Chr13 3188136 3203336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0440 1 561 EF-hand Containing Proteins AT3G44330 72.310 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0440 - - gmx:100778865 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0379 7 2582580 2590374 Lan13g0440 13 3188136 3203336 LSH