Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0340 ATGTCTTCTTCATTGGAGCGTGTAGATCTTGACGGTAACCAAATAAAGCCAATTACAATATGCATGATCGGTGCCGGTGGCTTCATCGGTTCTCACCTATGTGAGAAGATCATGAACGAGACCCCACACAATGTTCTTGCCTTGGATGTTTACAACGATAAGATCAAACACCTTTTGGAACCCGATAATCTACCTTGGCACGGTCGCATTCATTTTCACCGCCTCAATATCAAAAACGATTCGAGACTCGAAGGCCTCATCAAGATGTCAGATCTGACTATAAATCTGGCTGCAATTTGTACTCCGGCGGATTATAATACACGACCTCTCGATACAATTTTCAGCAATTTCATTGATGCACTTCCTGTGGTGAAGTACTGTTCGGAAAATAACAAAAGGCTCATTCATTTCTCTACATGTGAAGTGTATGGGAAAACTATTGGGAGCTTTCTCCCTAAAGATAGTCCTCTTCGTGAGGATCCTGCTTACTATCTTCTTAAAGAAGAGGACTCTCCATGCATTTTTGGTTCAATTGAAAAGCAGAGGTGGTCCTATGCCTGTGCAAAGCAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGTATGGATTTCACAATTGTGAGGCCTTTTAACTGGATTGGACCTCGGATGGATTTCATTCCTGGCGTTGATGGTCCAAGTGAGGGTGTTCCTCGTGTCCTGGCTTGCTTCAGCAACAATCTTCTCAGAGGAGAGCCTCTCAAGCTTGTGGATGGTGGCGAATCCCAGCGAACCTTTGTTTACATTAAGGACGCTATTGAAGCTGTCTTATTGATGATTGAAAATCCTGCCAGGGCCAATGGCCATATCTTTAATGTGGGTAACCCAAACAATGAGGTTACAGTTAGGCAGCTAGCTGAAATGATGATTCAGGTTTACTCAAAGGTAAGTGGAGAACAAACCCCTGAAACACCTACAATTGATGTGAGCTCAAAAGAATTTTATGGCGAGGGATATGATGACAGTGATAAGAGAATTCCTGACATGACCATAATAAACAAGCAGCTTGGATGGAATCCTAAGACCTCACTTTGGGATCTGCTTGAATCTACTCTCACTTATCAGCACAGGACATATGCCGAAGCCATCAAGAAAGTCATTGCAAAACCAATTGCAACTTAA 1170 0.4291 MSSSLERVDLDGNQIKPITICMIGAGGFIGSHLCEKIMNETPHNVLALDVYNDKIKHLLEPDNLPWHGRIHFHRLNIKNDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIFSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLREDPAYYLLKEEDSPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRGEPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMIQVYSKVSGEQTPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPIAT* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0340 389 Gene3D - 18 380 - -
Lan7g0340 389 Pfam NAD dependent epimerase/dehydratase family 20 290 IPR001509 -
Lan7g0340 389 PANTHER - 6 388 - -
Lan7g0340 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 372 IPR036291 -
Lan7g0340 389 CDD Arna_like_SDR_e 19 374 IPR045869 GO:0016831
Lan7g0340 389 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 6 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0340 Lan-Chr7 2328510 2331453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0340 18 384 Miscellaneous Gene Families AT1G02000 20.256 2.86e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0340 K12449 - gmx:102667779 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0340 7 2328510 2331453 Lan7g0340 7 2328510 2331453 ECH
Lan7g0340 7 2328510 2331453 Lan8g1626 8 23229477 23232430 LSH
Lan3g0108 3 756022 759089 Lan7g0340 7 2328510 2331453 PCT
Lan7g0340 7 2328510 2331453 Lan3g0108 3 756022 759089 PCT