Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0108 ATGGCTTCTTCTACTTCTACTCGAGTAGATCTAGATGGGAACCCCATTAATGCAATCACCATATGCATGATCGGTGCAGGTGGATTCATTGGGTCACACCTATGCGAGAAGCTGATGCATGAGACACCACACAAGGTTCTTGCTTTGGATGTCTACAATGATAAAATCAAACATCTATTGGAACCAGATACTCTACCATGGCATGGTAGAATCCAATTCCATCGCCTCAATATCAAACAAGATTCAAGACTAGAAGGTCTTATCAAAATGGCAGATCTGACAATTAATCTTGCTGCTATATGCACTCCTGCGGATTACAACACGCGCCCTTTGGACACCATTTATAGTAACTTCATTGATGCTCTTCCTGTGGTGAAGTACTGTTCTGAAAACAACAAGCGTCTCATTCATTTCTCTACTTGTGAAGTGTATGGGAAAACCATTGGGAGTTTTCTCCCCAAAGATAGCCCTCTTCGTCAGGATCCGGCATACTATCTTCTTAAAGAAGATGACTCTCCGTGCATTTTTGGTTCCATTGAAAAGCAGAGATGGTCCTATGCCTGTGCAAAGCAGTTGATTGAGAGGCTCATTTATGCTGAGGGTGCTGAAAACGGCATGGACTTCACAATTGTTAGACCTTTTAATTGGATCGGACCGAGAATGGATTTCATTCCAGGCATTGATGGTCCAAGTGAGGGTGTTCCACGGGTTCTAGCATGCTTTAGCAATAATCTCCTCCGCGGGGAGCCTCTCAAGCTCGTGGATGGTGGCCAATCCCAGAGGACATTTGTCTATATCAAGGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAATCCGGCCAGGGCCAACGGGCATATTTTTAATGTCGGCAACCCAAACAATGAGGTCACAGTCAAGCAACTTGCTGAAATGATGACTCAGGTTTACTCTAAGGTAAGTGGAGAACCTTCTTTGGAAAGTCCTACAATTGATGTGAGCTCCAAAGAATTTTATGGTGAGGGTTATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATTAACAAGCAACTTGGCTGGAATCCGAAGACATCCCTTTGGGACCTGCTTGAATCCACTCTGACCTATCAGCACAGGACTTATGCTGAAGCCATGAAGAAAGTGATTGGAAAGCCTCTTGCAAGTTAA 1173 0.4365 MASSTSTRVDLDGNPINAITICMIGAGGFIGSHLCEKLMHETPHKVLALDVYNDKIKHLLEPDTLPWHGRIQFHRLNIKQDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYLLKEDDSPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMTQVYSKVSGEPSLESPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAMKKVIGKPLAS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0108 390 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 7 389 - -
Lan3g0108 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 373 IPR036291 -
Lan3g0108 390 Pfam NAD dependent epimerase/dehydratase family 21 291 IPR001509 -
Lan3g0108 390 Gene3D - 19 382 - -
Lan3g0108 390 CDD Arna_like_SDR_e 20 375 IPR045869 GO:0016831
Lan3g0108 390 PANTHER - 7 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0108 Lan-Chr3 756022 759089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0108 17 383 Miscellaneous Gene Families AT1G02000 20.823 8.53e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0108 K12449 - gmx:100792879 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0108 3 756022 759089 Lan7g0340 7 2328510 2331453 PCT
Lan3g0108 3 756022 759089 Lan8g1626 8 23229477 23232430 PCT
Lan7g0340 7 2328510 2331453 Lan3g0108 3 756022 759089 PCT
Lan8g1626 8 23229477 23232430 Lan3g0108 3 756022 759089 PCT