Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0307 ATGGCCGGTAAAGGTGGAGCGGCTCCGGCTACGTACTCACCATCTCCGACCACTCAGAAAAAGAAAGCTCCGCTTTTCAAAGAAGATTGGGTTCGACCTGATGGCCGCAGTTTTCATCAATGCAGACCTGCATTTTTTAGAACCGGTGCTGTGAATGCTGCATCCGGATCTGCTTATGCAGAGTTTGGGAATACCAAGGTCATTGTATCCGTATTTGGGCCGAGAGAGAGTAAAAAAGCAATGATGTACAGTGATACAGGGCGTCTGAATTGTAGTGTCGGCTTTACAACATTTGCAACTCCAGTTCATGGACAGGGTTCAGACCACAAAGAGTACACTGCAATGCTTCATAAAGCTTTGGAGGGTGCAATAATATTGGAATCTAGTGGCAGTGATCTCCCAGTTGTCATATCATGTGCGAGCCTTGCCCTTGCAGATGCTGGAATAATGATGTATGATCTTGTTGCCTCAGTTTCAGTGTCCTGTCTCAGTAAGAACCTTGTCATTGATCCAATTTTTGAGGAGGAAAACTACCAAGATGGAAGCTTAATGATTACTTGCATGCCTTCTCGCTACAAAATCACCCAACTCACAGTTACCGGGGAATGGTCCACCCCAAATATTAATGAGGGAATGCAGCTGTGCCTGGATGCTTGTGCAAAGCTTGCTAAGATTATGAGGTCATGTTTGAAAGAAGCTGCTTCGGCTTCAAAAGAATAG 720 0.4528 MAGKGGAAPATYSPSPTTQKKKAPLFKEDWVRPDGRSFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCSVGFTTFATPVHGQGSDHKEYTAMLHKALEGAIILESSGSDLPVVISCASLALADAGIMMYDLVASVSVSCLSKNLVIDPIFEEENYQDGSLMITCMPSRYKITQLTVTGEWSTPNINEGMQLCLDACAKLAKIMRSCLKEAASASKE* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0307 239 MobiDBLite consensus disorder prediction 1 24 - -
Lan7g0307 239 Pfam 3' exoribonuclease family, domain 1 40 141 IPR001247 -
Lan7g0307 239 Gene3D - 128 234 IPR027408 -
Lan7g0307 239 Gene3D - 6 127 IPR027408 -
Lan7g0307 239 SUPERFAMILY Ribonuclease PH domain 2-like 151 235 IPR036345 -
Lan7g0307 239 PANTHER EXOSOME COMPLEX COMPONENT MTR3 17 234 - -
Lan7g0307 239 PANTHER EXOSOME COMPLEX COMPONENT 17 234 - -
Lan7g0307 239 Pfam 3' exoribonuclease family, domain 2 153 213 IPR015847 -
Lan7g0307 239 SUPERFAMILY Ribosomal protein S5 domain 2-like 27 180 IPR020568 -
Lan7g0307 239 CDD RNase_PH_MTR3 41 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0307 Lan-Chr7 2000055 2004167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0307 K12587 - gmx:100819105 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0307 7 2000055 2004167 Lan13g0388 13 2624529 2628407 LSH