Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0388 ATGGCCGGTAAAGGTGGAGCGAATCCGGCGACGTACTCGCCGTCTCCGACCACTCAGAAAAAGAAAGCTCCGTTGTTCAAAGAAGATTGGGTCCGACCCGATGGCCGCGGTTTTCATCAATGTAGACCTGCATTTTTTAGAACTGGTGCTGTGAATGCTGCATCTGGATCTGCATATGCAGAGTTTGGGAATACCAAGGTCATTGTATCTGTATTTGGGCCAAGAGAGAGTAAGAAGGCGATGATGTACAGTGATACAGGGCGCCTGAATTGCAATGTCAGCTTTACAACATTTGCCACTCCAGTTCGTGGACAGGGTTCAGACCACAAAGAGTACACTGCTATGCTTCATAAAGCTTTGGAGGGTGCAATAATACTGGAATCTTTCCCCAAAACAACCGTGGATGTTTTTGCATTGGTGCTGGAATCCAGTGGCAGTGATCTCCCAGTTGTCATATCATGTGCTAGCCTTGCCCTGGCAGATGCTGGAATAATGATGTATGACCTTGTTGCCTCAGTTTCAGTGTCATGTGTCAGTAAGAACCTTGTCATTGATCCTATTTTTGAGGAGGAAAACTACCAAGATGGAAGCTTAATGATTACTTGCATGCCTTCTCGCTACGAAATCACCCAACTCACAGTTACTGGGGAATGGTCCACCCCAAAGATTAATGAGGGAATGCAGCTGTGCCTGGATGCTTGTGCAAAGCTTGCTAAGATTATGAGGTCATGTTTGAAAGAAGCTGCATCTGATTCACAAGATGTGCTGTTAAGTTGTTCTATCTCATGTTTTTGTTTTGTTTTGTTTTTCTTTCTGCTCAACATTGAGAGAAATTTTTTGTTGGAAGGGGTTAGGGAGGGAGAGATGCCTTGCCTTGCATGTCCTGCAAATTTTGTGCTTATGACTTCGTCAAAGAATGCTAAAAAAATTCTCATAGTAATAGGCATGGTCTGGTTCATCAAAAAAAGGTTTGGGCCAAATTTATGTAAATAG 993 0.4371 MAGKGGANPATYSPSPTTQKKKAPLFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSFTTFATPVRGQGSDHKEYTAMLHKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSCVSKNLVIDPIFEEENYQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAKIMRSCLKEAASDSQDVLLSCSISCFCFVLFFFLLNIERNFLLEGVREGEMPCLACPANFVLMTSSKNAKKILIVIGMVWFIKKRFGPNLCK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0388 330 MobiDBLite consensus disorder prediction 1 24 - -
Lan13g0388 330 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Lan13g0388 330 SUPERFAMILY Ribonuclease PH domain 2-like 166 251 IPR036345 -
Lan13g0388 330 SUPERFAMILY Ribosomal protein S5 domain 2-like 27 195 IPR020568 -
Lan13g0388 330 Pfam 3' exoribonuclease family, domain 2 168 228 IPR015847 -
Lan13g0388 330 PANTHER EXOSOME COMPLEX COMPONENT MTR3 17 249 - -
Lan13g0388 330 CDD RNase_PH_MTR3 41 247 - -
Lan13g0388 330 PANTHER EXOSOME COMPLEX COMPONENT 17 249 - -
Lan13g0388 330 Gene3D - 18 255 IPR027408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0388 Lan-Chr13 2624529 2628407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0388 K12587 - gmx:100819105 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0307 7 2000055 2004167 Lan13g0388 13 2624529 2628407 LSH