Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0208 ATGCATTTTTTCAGAAGGATGGAGGTTTTTATGTTTGGGCTAGTGTCCCTTGTGTTATGTGGTTATGCTTTGAGTAAAGAGTGCACAAACATTCCAACCCAATCACACACATTAAGGTATGAGATGTTAAGATCAAAGAATAAAACATGGAAGCCAGAGTTGAGAATTCATAACCATTTGACACCAACTGATGATTCAGCCTGGGAGGATATGCTGCCAAGGAGGTTCATGAGAGAGGATCATCAAAATGAATGGTCAATGATGTATCGGAAAATTAAGAACTTGGGTATGTTCGATACGCCTAAAGGGTTTCTAAAAGAGGTGTCTTTGCAAGATGTTAGATTGCAAGAGGGTTCAATTCATGCTCAAGCACAGAACACAAATTTGGAGTATTTGTTAATGTTGGATGTGGATAGGTTGATTTGGAGCTTTAGGAACACTGCTGGTCTACCTACACCTTCTCAACCGTACGGAGGCTGGGAAAGTGCTGATATGGAGCTCAGGGGTCATTTTGTTGGACACTACTTGAGCGCATCGGCTTTAATGTGGGCCAGCACAAATAATAGTAGCCTGCAGGAGAAAATGTCAGCTCTTGTTGCTGGCCTGTCTGCCTGTCAAGACAAAATTGGAACAGGATATCTCTCTGCATTTCCATCCGAGTTTTTTGATCGATATGAAGCTGTTCAGCCTGTGTGGGCTCCCTATTACACCATTCACAAGATCTTGGCCGGCTTGTTGGATCAACATGCTATAGCTGGAAACCCACAGGCTCTAAAAATGGTGACATGGATGGTCGATTACTTTTACAACCGAGTGCAGAATGTTATAACACAGTTCAGTATAAATAGACACTATCAGTCACAAAATGAGGAAACAGGAGGAATGAATGATGTCCTTTACAGATTATATAGCTTAACAGGAGATCAAAAGCATCTAGTTTTGGCTCACCTTTTTGACAAGCCATGCTTTCTGGGATTGCTTGCGGTCCAGGCTAATGATATAGCTGATTTTCATGCTAATACACATATCCCGATTGTTGTTGGAGCTCAAATGCGGTATGAAGTCACAGGAGATCCACTTTATAAGGATATTGGGACATTCTTTATGGACATCATGAACTCTTCTCACATTTATGCAACTGGAGGGACATCAGACAACGAGTTCTGGCATGATCCGAAGAGAATTGGAGACAGCCTAAAAACAGCAGAGAATGAAGAGTCATGCACAACATATAATATGCTTAAGGTTTCGCGCCACCTGTTTAGATGGACCAAAGAAGTCTCTTATGCAGATTATTATGAGCGCGCCTTAACAAATGGCGTACTCAGCATTCAAAGAGGGACAGATCCTGGAGTGATGATTTATATGCTTCCACTAGGACTTGGGGTTTCCAAGGGTACAAGTTCTCATAGCTGGGGAACACCGTTTGATTCTTTCTGGTGCTGCTATGGAACTGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATTTATTTTGAAGAGGAAGGGAACGATCCTAGTCTTTATATCATTCAGTACATATCAAGCTCATTTAATTGGCAATTTGGGAAACTTATTCTTAATCAGACAGTTGATCCAGCTTCTTCATGGGATCCTTACCTACGAGTGGCGTTTACATTATCTCCTACGGAGAACTCTGGTACTTCATCCACATTGAACTTTCGAGTGCCATCTTGGACTCAAACTAATGGTGCCAATGGGATATTGAATGCGGAAAATGTATCTGTGCCAGCTCCAGGAACTTTTTTATCAGTTACACGACAGTGGAGTGCTGATGACAAGTTTAGCCTTCAGCTGCCTATTACCCTCACAACAGAGGCCATAAAAGATGACAGGTCTGAATTTGCATCCCTTCAAGCAATTCTGTATGGTCCCTATCTTCTTGCTGGTCATACCGAAAGTGATTGGGACATTACAGCTGGGGCTAACACAACTATTTCAGAATGGATCACACCCATTCCTGCCAGCTACAATAGTCAACTAATTTCCTTTTCCCAAAACTCCTCAGAATCAACTTTAGTTTTGACAAATACAAACCTTTCACTTACAATGCAAATGATACCTGAACCTGGCACTGCTTTGGCTCTTCATGCAACATTTAGACTTGGACTTCAAAATTCTTCTACAGAGCTTTCTTCGTTGACAAATGCTGTTGGTAAATCCGTGACATTAGAACCCTTTGATCTTCCTGGAATGAATGTGATCCACCAAGGACAAGATAAACCTCTTGTCATTTCTTCAGAAGTTGAGCCATCTTCTATTTTTCTTGTGGTACAAGGTTTGGATGGAAGAAATGAAACCATATCTTTAGAATCCCAAAGCAACCGTGGTTGCTATGTGTACGGTGGCGTGAGCTCTGGGGCAGAAGTGAAGCTCGGTTGCAAGTCTGATTCTGATGCTACCTTTAACAATGCAACAAGCTTTGTTGCAGAGGAAGGATTGAGACAATATCATCCTATCAGCTTTGTGGCTAAAGGGACAAATAGGAATTTTCTTTTGGAACCATTATTCAACTTCAGAGATGAGAATTATACAGTTTATTTCAACATTCACGAATGA 2580 0.4136 MHFFRRMEVFMFGLVSLVLCGYALSKECTNIPTQSHTLRYEMLRSKNKTWKPELRIHNHLTPTDDSAWEDMLPRRFMREDHQNEWSMMYRKIKNLGMFDTPKGFLKEVSLQDVRLQEGSIHAQAQNTNLEYLLMLDVDRLIWSFRNTAGLPTPSQPYGGWESADMELRGHFVGHYLSASALMWASTNNSSLQEKMSALVAGLSACQDKIGTGYLSAFPSEFFDRYEAVQPVWAPYYTIHKILAGLLDQHAIAGNPQALKMVTWMVDYFYNRVQNVITQFSINRHYQSQNEETGGMNDVLYRLYSLTGDQKHLVLAHLFDKPCFLGLLAVQANDIADFHANTHIPIVVGAQMRYEVTGDPLYKDIGTFFMDIMNSSHIYATGGTSDNEFWHDPKRIGDSLKTAENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGLGVSKGTSSHSWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGNDPSLYIIQYISSSFNWQFGKLILNQTVDPASSWDPYLRVAFTLSPTENSGTSSTLNFRVPSWTQTNGANGILNAENVSVPAPGTFLSVTRQWSADDKFSLQLPITLTTEAIKDDRSEFASLQAILYGPYLLAGHTESDWDITAGANTTISEWITPIPASYNSQLISFSQNSSESTLVLTNTNLSLTMQMIPEPGTALALHATFRLGLQNSSTELSSLTNAVGKSVTLEPFDLPGMNVIHQGQDKPLVISSEVEPSSIFLVVQGLDGRNETISLESQSNRGCYVYGGVSSGAEVKLGCKSDSDATFNNATSFVAEEGLRQYHPISFVAKGTNRNFLLEPLFNFRDENYTVYFNIHE* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0208 859 Gene3D - 718 852 - -
Lan7g0208 859 SUPERFAMILY AbfB domain 754 840 IPR036195 GO:0046373|GO:0046556
Lan7g0208 859 Pfam Beta-L-arabinofuranosidase, GH127 112 636 IPR012878 -
Lan7g0208 859 PANTHER - 3 858 - -
Lan7g0208 859 SUPERFAMILY Six-hairpin glycosidases 169 445 IPR008928 GO:0005975
Lan7g0208 859 PANTHER PROLINE-TRNA LIGASE (DUF1680) 3 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0208 Lan-Chr7 1293085 1299606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0208 K09955 - gmx:100781521 1343.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0208 7 1293085 1299606 Lan7g0208 7 1293085 1299606 ECH
Lan7g0208 7 1293085 1299606 Lan8g1753 8 24204919 24210269 LSH
Lan7g0208 7 1293085 1299606 Lan13g0293 13 1896182 1907082 LSH