Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0293 ATGTCCTTACCTTTCACGAGATGGTTTTCAAAAAAGATGGAGGCTTTTCTGTATCTGCTAGTGTTCTTGGTTCTGTGTGGTTATGCTATGAGTAAAGAGTGCACAAACATTCCAACCCAATCACACACATTCCGGTATGAATTGTTAGCATCAAATAATGAAACATGGAAGCAAGAGGTTATGTCTCATTACCATTTGACACCAACTGATGATTCAGCTTGGGAGGATATGCTACCAAGGAGGTTCTTGAAAGAGGATCATGAACATGAATGGTCAATGATGTATAGGAAAATCAAGAACTTGGGTGTGTTTAAACCACCTCAAGGGTTTCTAAAAGAGGTTCCTTTGAAGGATGTGAGATTGCAAGAGGGTTCAATTCATGCTCAAGCACAGAAGACAAATTTGGAGTATTTGTTAATGTTGGATGTGGATAGATTGATTTGGAGCTTCAGAAAAACTGCTGGTTTACCTTATCCTTCTACACCTTATGGAGGTTGGGAAGGTGCTGAGGTTGAGCTCAGGGGTCATTTTGTTGGCCATTACTTGAGCGCATCGGCTCTAATGTGGGCCAGCACACAAAATAATAGCCTGATGGAGAAAATGTCAGCTCTTGTTGCTGGCCTATCTGCTTGTCAAGAGAAAATTGGGACAGGATATCTCTCTGCATTTCCATCCGAGTTTTTCGATCGATTTGAAGCTATTCAGCCTGTTTGGGCTCCCTATTACACCATTCACAAGATCTTGGCCGGCTTGTTGGATCAACATACTATAGCTGGAAATCCTCAGGCTCTAAAAATGGTGACATGGATGGTTGATTACTTTTACAACCGCGTGCTAAATGTAGTAACACATCTCAGTATAAATAGACACTATCAATCACTAAACGAGGAAACAGGAGGAATGAATGATGTCCTTTACAGATTATATAGCTTAACTGGAGATCCAAAGCATCTAGTGTTAGCTCACCTTTTTGACAAGCCATGCTTTCTGGGATTGCTTGCGGTCCAGGCTAATGATATAGCTGATTTTCATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGGTATGAAGTCACAGGAGATCCACTTTATAAGGAAATTGGGACATTCTTTATGGACCTTATTAACTCTTCTCACAGCTATGCAACTGGAGGGACATCAGTCAGCGAGTTCTGGCATGATCCGATGAGAATAGCAGACAACCTAAAAACAACAGAGAATGAAGAGTCATGCACAACTTATAATATGCTGAAGGTTTCGCGCCACCTCTTTAGATGGACCAAAGAAGTCTCTTATGCAGATTATTATGAGCGCGCCTTAACCAATGGTGTACTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCACTAGGACGCGGGGTTTCCAAGGCTAGAACTGGACATAGCTGGGGAACACCATTTGACTCTTTCTGGTGCTGCTATGGAACTGGAATCGAATCGTTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAGGGAATGATTCTACTCTTTACGTCATTCAGTACATATCAAGCTCATTTAATTGGACATCGGGAAAAGTTATTCTTAATCAGACAGTTGTTCCAGCTGCTTCATGGGACCCTTACCTAAGAGTGACATTTACATTTTCTCCTACTGAGGAAACTGGTACTTCGTCCACATTGAACTTTCGAATACCATCTTGGACTCATACAAATGGTGCCAAGGGGATATTGAATGGTGAAACTTTATCTTTGCCAGCTCCAGGAAATTTTTTATCAGTCACCCGACAGTGGAGTGCTGGTGACAAACTGACCCTTCAATTGCCGATCACCCTCAGAACAGAGGCCATAAAAGATGACAGGTCTGAATATGCATCCCTTCAAGCAATTCTTTATGGTCCTTACCTACTTGCTGGTCATACTACCGGAGATTGGGACATTAAAGCTGGGACTAACACAGCTATTTCTGAATGGATCACACCCATTCCTGCCAGCTACAATAGTCAACTAATTTCTTTCTCCCAAGACTATTCAAAATCAAGTTTTGTTTTAACAAACTCAAACCAATCACTTACAATGCAAAAGTTACCTGCGCCCGGCACCGATTTGGCTCCTCATGCAACGTTTCGACTTATATTAAAAGATTCTTCCACAAAGCTCTCAACTTTGGCAAAGGCTGTTGGTGAATCAGTGATGTTAGAACCATTTGATCTTCCGGGAACGAATGTTATTCACCAAGGAGCAGATCAACCTCTTGCCATTTCTTCAAGGGTTAAGCCGTCTTCTATTTTTATTGTGGTGCCAGGATTGGATGGAAGAAATGAAACCATATCTTTAGAATCTCAAAGCAACAATGGTTGCTATGTGTACAGTGGTGTAATAAGCTCTGATGCAGAAGTGAAACTCAGTTGCAAATCTGATTCTGATGCTACTTTTAATCAAGCAGCAAGCTTTGTTGGATGGAAAGGATTAAGAGAATATAATCCTATAAGCTTTGTGGCTAAAGGGACAAACAGGAATTTTCTTTTGGAGCCATTACTCACCTTCAGAGATGAATATTATACAGTGTATTTCAACATTCAAGACTAA 2601 0.4102 MSLPFTRWFSKKMEAFLYLLVFLVLCGYAMSKECTNIPTQSHTFRYELLASNNETWKQEVMSHYHLTPTDDSAWEDMLPRRFLKEDHEHEWSMMYRKIKNLGVFKPPQGFLKEVPLKDVRLQEGSIHAQAQKTNLEYLLMLDVDRLIWSFRKTAGLPYPSTPYGGWEGAEVELRGHFVGHYLSASALMWASTQNNSLMEKMSALVAGLSACQEKIGTGYLSAFPSEFFDRFEAIQPVWAPYYTIHKILAGLLDQHTIAGNPQALKMVTWMVDYFYNRVLNVVTHLSINRHYQSLNEETGGMNDVLYRLYSLTGDPKHLVLAHLFDKPCFLGLLAVQANDIADFHANTHIPVVVGSQMRYEVTGDPLYKEIGTFFMDLINSSHSYATGGTSVSEFWHDPMRIADNLKTTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGRGVSKARTGHSWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGNDSTLYVIQYISSSFNWTSGKVILNQTVVPAASWDPYLRVTFTFSPTEETGTSSTLNFRIPSWTHTNGAKGILNGETLSLPAPGNFLSVTRQWSAGDKLTLQLPITLRTEAIKDDRSEYASLQAILYGPYLLAGHTTGDWDIKAGTNTAISEWITPIPASYNSQLISFSQDYSKSSFVLTNSNQSLTMQKLPAPGTDLAPHATFRLILKDSSTKLSTLAKAVGESVMLEPFDLPGTNVIHQGADQPLAISSRVKPSSIFIVVPGLDGRNETISLESQSNNGCYVYSGVISSDAEVKLSCKSDSDATFNQAASFVGWKGLREYNPISFVAKGTNRNFLLEPLLTFRDEYYTVYFNIQD* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0293 866 Pfam Beta-L-arabinofuranosidase, GH127 118 642 IPR012878 -
Lan13g0293 866 Gene3D - 727 849 - -
Lan13g0293 866 SUPERFAMILY Six-hairpin glycosidases 177 450 IPR008928 GO:0005975
Lan13g0293 866 PANTHER PROLINE-TRNA LIGASE (DUF1680) 16 865 - -
Lan13g0293 866 SUPERFAMILY AbfB domain 743 846 IPR036195 GO:0046373|GO:0046556
Lan13g0293 866 PANTHER - 16 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0293 Lan-Chr13 1896182 1907082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0293 K09955 - gmx:100781521 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0208 7 1293085 1299606 Lan13g0293 13 1896182 1907082 LSH
Lan8g1753 8 24204919 24210269 Lan13g0293 13 1896182 1907082 LSH