Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0201 ATGCTTATGCCACAAAGTTATCTATCAAATTCAACTCCTTCACCTTGTTGTTTCACTCACATATTTCAAAAGCCATGCCTCCATGGCACTAGCTATTACCCTTCTTTTCAGGTTGGGTCAAGGCCATGGTTCCAAAACAAAAGGAGTGTAAGAAGGGCCAGGAATGGATACAATAATAGCAGCAATAAAATAAAAGCTGTGGCAGTGAGTGAACAAGCAGAAAAGAAAACAGTAAAGGTTAAAGCTACTATAACTGTTCATTTAACAGTTGGTGGATTTTTCTCAGATTTGAGTTTAGAACGAGGAGCCGATGATATTACCGATTTAGTTGGTAAATCATTGCTCTTGGAGCTTGTTAGCACCACGCTTAATCCCAAGACGAAGACAGAGAAAGACACGATCAAAGGTTTCGCCCACAGGACATTTCAATTAGTAGACAACGTAAAGTATGAGGCTGAATTTGAAGTACCACATAGTTTTGGAGAGATTGGAGCAATTTATGTGGAGAATGAGCATCACAAGGAGATGTTTATCAATGACGTTTTGTTTGAAGGTTTCCCCACTGGTCCCTTTCATATATCATGCAACTCTTGGGTTCATTCCAAAAATGATAATCCTGCCAAGAGGGTCTTCTTCTCCAACAAGTCGTATTTGCCATCTGAAACTCCAGAAGGGTTGAAGAGGATAAGAGGAGAGAAATTGGTAGAATTGAGAGGGAATGGAGAAGGTGAAAGAAAGCCGTTCGAGCGTATATACGATTATGATGTATACAATGATATTGGAGATCCAGATACTAACGTCGAACTCAAAAGACCAGTTCTAGGTGGCAAACAAAATCCTTATCCTCGCCGTTGTAGAACCGGAAGACCTCGTTCCAAGACAGATCCATTGTCTGAGAAAAGAAGTGACAGTGTGTATGTTCCAAGAGATGAATGTTTCTCAGAAGTGAAGCAGCTAACATTTTCTACAAAGGCTGTATATTCAGTGTTGCATGGTCTAGTTCCATCTCTGCAAACAGCTATAATTGACAAGGATCTTGGCTTTCCTCTCTTCTCATCCATAGATGACTTATTTAATGAAGGAGTTAATTTGCCTATATTAAAAGGCAAAGGTCTTATTAGGAACATTATACCAAGATTAGTTAAGGTTATTCAGGATACTGAGAATGAAATCCTCCGTTTTGAGACTCCAGCAACAATGGATAGGGACAGATTCTTTTGGTTTAGAGATGAAGAATTTGCAAGACAGACCCTTGCAGGCCTTAACCCATGTTCCATTCAACTCGTCACGGAATGGCCATTGAAAAGCAAGCTTGACCCTGATGTATATGGCCCCGCAGAATCTGCAATCACCACTGAAATAATTGAGGAAGAAATCAGAGGATTCATGACTGTTGAAGAGGCCATAAAACAGAAGAAGCTATTCATCCTGGACTACCATGATTTGTTATTGCCAGTAGTAGAGAAAGTTAGAGAACTTGAAGGTAGAACCTTGTATGGATCTAGGACGTTGTTCTTCTTAAACAAAGACAACACATTGAGACCGCTAGCTATTGAGCTCACTCGGCCACCGATTAATGGAAATCCACAATGGAAGGAAGTGTTCAAACCTGCTTGGCACTCTACCAGTGTTTGGCTTTGGAGGCTTGCCAAAGCTCATGTCCTTGCCCATGACTCTGGTTACCATCAACTAGTTAGTCACTGGCTAAGAACTCATTGTGCTACGGAACCTTATATCATCGCAACAAACAGGCAATTGAGTGCAATGCATCCAATCTATAGGCTTTTACATCCACATTTTAGGTACACAATGGAGATCAATGCCCTTGCTCGTGAGGCATTGATAAATGCAAATGGAATCATAGAGAGCAGCTTTAGTCCTGGGAAGTATTCCCTCTTACTAAGTTCAATTGCCTATGACAAGGAATGGCAATTTGACTTGCAAGCCCTTCCTGCTGACCTTATCAATAGAGGATTGGCCGTGGAGGATCCTAATGCTCCTCATGGTTTAAAGCTAACCATAGAAGACTATCCTTATGCCAATGACGGCCTCGTCCTTTGGGACACAATCAAAGGATGGGTTACTGATTATGTGAACCATTACTATTCAGAGCCAGGTCAAGTTGAGTCTGACAATGAACTACAAGCATGGTGGGAAGAGATCCGAACCGTAGGCCATGGTGACAAGAAGGATGAACCATGGTGGCCTGTTTTGAAAACCAAAGAAGATTTGGTTGGAATTGTGACCACCATTGTGTGGATAACATCAGGGCATCATGCAGCTGTGAACTTTGGGCAATACCATTATGCAGGGTATTTCCCAAACAGGCCCACCATTACAAGATGCAACATGCCTACAGAGGACCCTTCAGACCCAGAATGGGAATTGTTCTTGAAAAAACCGGAAGTGGCGCTGTTGAGTACCTTCCCATCTCAAATTCAGGCTACAACTGTAATGACAGTGTTGGATATATTGTCAACTCACTCACCAGATGAAGAGTATCTTGGGGAAACCTTAGAGCCAGCTTGGGGAGAGGATCCAATAGTCAATTCTGCATTTGAAAAGTTTAAGGGGAAGTTGATGGAGCTAGAAGGTATAATTGATGAAAGAAATGCAGATAGGACGCGGAAGAACAGAAATGGTGCTGGAATTGTGCCTTATGAGCTTCTGAAGCCGAATTCAGAGCCAGGAGTGACAGGAAAAGGAGTTCCATATAGCATTTCTATTTGA 2730 0.4187 MLMPQSYLSNSTPSPCCFTHIFQKPCLHGTSYYPSFQVGSRPWFQNKRSVRRARNGYNNSSNKIKAVAVSEQAEKKTVKVKATITVHLTVGGFFSDLSLERGADDITDLVGKSLLLELVSTTLNPKTKTEKDTIKGFAHRTFQLVDNVKYEAEFEVPHSFGEIGAIYVENEHHKEMFINDVLFEGFPTGPFHISCNSWVHSKNDNPAKRVFFSNKSYLPSETPEGLKRIRGEKLVELRGNGEGERKPFERIYDYDVYNDIGDPDTNVELKRPVLGGKQNPYPRRCRTGRPRSKTDPLSEKRSDSVYVPRDECFSEVKQLTFSTKAVYSVLHGLVPSLQTAIIDKDLGFPLFSSIDDLFNEGVNLPILKGKGLIRNIIPRLVKVIQDTENEILRFETPATMDRDRFFWFRDEEFARQTLAGLNPCSIQLVTEWPLKSKLDPDVYGPAESAITTEIIEEEIRGFMTVEEAIKQKKLFILDYHDLLLPVVEKVRELEGRTLYGSRTLFFLNKDNTLRPLAIELTRPPINGNPQWKEVFKPAWHSTSVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPIYRLLHPHFRYTMEINALAREALINANGIIESSFSPGKYSLLLSSIAYDKEWQFDLQALPADLINRGLAVEDPNAPHGLKLTIEDYPYANDGLVLWDTIKGWVTDYVNHYYSEPGQVESDNELQAWWEEIRTVGHGDKKDEPWWPVLKTKEDLVGIVTTIVWITSGHHAAVNFGQYHYAGYFPNRPTITRCNMPTEDPSDPEWELFLKKPEVALLSTFPSQIQATTVMTVLDILSTHSPDEEYLGETLEPAWGEDPIVNSAFEKFKGKLMELEGIIDERNADRTRKNRNGAGIVPYELLKPNSEPGVTGKGVPYSISI* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0201 909 MobiDBLite consensus disorder prediction 271 303 - -
Lan7g0201 909 Gene3D - 317 404 IPR027433 -
Lan7g0201 909 PANTHER LIPOXYGENASE 32 907 IPR000907 GO:0016702|GO:0046872
Lan7g0201 909 Gene3D - 218 316 - -
Lan7g0201 909 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 216 909 IPR013819 GO:0016702|GO:0046872
Lan7g0201 909 SMART LH2_4 78 214 IPR001024 GO:0005515
Lan7g0201 909 MobiDBLite consensus disorder prediction 288 303 - -
Lan7g0201 909 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 78 217 IPR036392 GO:0005515
Lan7g0201 909 Pfam PLAT/LH2 domain 147 212 IPR001024 GO:0005515
Lan7g0201 909 PRINTS Lipoxygenase signature 544 561 IPR013819 GO:0016702|GO:0046872
Lan7g0201 909 PRINTS Lipoxygenase signature 562 579 IPR013819 GO:0016702|GO:0046872
Lan7g0201 909 PRINTS Lipoxygenase signature 582 602 IPR013819 GO:0016702|GO:0046872
Lan7g0201 909 SUPERFAMILY Lipoxigenase 218 909 IPR036226 -
Lan7g0201 909 Gene3D - 406 539 - -
Lan7g0201 909 PRINTS Plant lipoxygenase signature 183 201 IPR001246 GO:0016491
Lan7g0201 909 PRINTS Plant lipoxygenase signature 209 230 IPR001246 GO:0016491
Lan7g0201 909 PRINTS Plant lipoxygenase signature 248 264 IPR001246 GO:0016491
Lan7g0201 909 PRINTS Plant lipoxygenase signature 280 299 IPR001246 GO:0016491
Lan7g0201 909 PRINTS Plant lipoxygenase signature 345 366 IPR001246 GO:0016491
Lan7g0201 909 PRINTS Plant lipoxygenase signature 392 408 IPR001246 GO:0016491
Lan7g0201 909 PRINTS Plant lipoxygenase signature 431 450 IPR001246 GO:0016491
Lan7g0201 909 PRINTS Plant lipoxygenase signature 499 523 IPR001246 GO:0016491
Lan7g0201 909 PRINTS Plant lipoxygenase signature 822 836 IPR001246 GO:0016491
Lan7g0201 909 ProSitePatterns Lipoxygenases iron-binding region signature 1. 562 576 IPR020833 GO:0016702|GO:0046872
Lan7g0201 909 Pfam Lipoxygenase 225 892 IPR013819 GO:0016702|GO:0046872
Lan7g0201 909 Gene3D PLAT/LH2 domain 56 217 - -
Lan7g0201 909 Gene3D - 541 908 - -
Lan7g0201 909 CDD PLAT_LH2 78 214 IPR042057 -
Lan7g0201 909 ProSitePatterns Lipoxygenases iron-binding region signature 2. 589 599 IPR020834 GO:0016702|GO:0046872
Lan7g0201 909 ProSiteProfiles PLAT domain profile. 93 213 IPR001024 GO:0005515
Lan7g0201 909 PANTHER LIPOXYGENASE 32 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0201 Lan-Chr7 1235949 1241915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0201 156 909 Acyl Lipid Metabolism Gene Families AT3G45140 61.873 0.0 985
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0201 K00454 - gmx:100787202 1401.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0201 7 1235949 1241915 Lan7g0201 7 1235949 1241915 ECH
Lan7g0201 7 1235949 1241915 Lan13g0290 13 1867506 1876361 LSH