Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0187 ATGGGGAAGCCTTTGTTTTATGAGATATTGGAAAAACCAGCCACTAGTTGTATTATAGGAATTTGCAGTGCAATTTGGTTTTACATTCAGAAGAAAAATATTGGGTATTCACACGTGGGTCTGAGTTATGAGACTGCAATTGAGGGGCACTATTGGAGGATCATCACCTCTGCATTTTCACATATAAGTGCTATTCATCTTGTCTTTAACATGAGTGCCCTTTGGAGTCTTGGGGTGGTAGAGCAATTAGATCACATGGGCCTTGGTGTTGGTTACTATTTGCAGTACACACTTGTGATGGTTGTTTCGTCCGGAATGCTTGGTCTGGCTATGTATCACTTATTGATTCAAAGATTCAAGATTGAGTATTTTCGTCGAGTGACGGTTGTTGGGTACTCATGTGTTGTTTTTGGATGGATGACAATTCTATCTGTGAAGCAACCTTCTTCCAAGTTGGAGCTTTTTGGATTCCTTTCTCTTCCTATCAGTTTTGCGCCATTTGAATCGCTTATTTTCACCTCTATCATTGTTCCTCAGGCGAGTTTTATCGGTCATTTATCAGGGATTATTGTTGGATATGCTATAGCATGGGGTTTTATTCATGGGATGAATAGCTACTGGGCGCTTTCCTTATTGGGTTGGATTGCACTTGTCTTTGTTTGGAGTTTGAAGAAATCTGGTGCAGTTGATCTCAACTTTCTTGAGATTGAATCTGTAACTGAGCCTTCTTTACCAGTACGGTTTTTGGCATCAGGTAGTCGCAGAACATTGTCAAATGGAAATGTTGGCATTGTCTAA 798 0.4023 MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHYWRIITSAFSHISAIHLVFNMSALWSLGVVEQLDHMGLGVGYYLQYTLVMVVSSGMLGLAMYHLLIQRFKIEYFRRVTVVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFIGHLSGIIVGYAIAWGFIHGMNSYWALSLLGWIALVFVWSLKKSGAVDLNFLEIESVTEPSLPVRFLASGSRRTLSNGNVGIV* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0187 265 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Lan7g0187 265 PANTHER RHOMBOID PROTEASE 1 259 - -
Lan7g0187 265 SUPERFAMILY Rhomboid-like 13 200 IPR035952 -
Lan7g0187 265 Gene3D - 10 198 IPR035952 -
Lan7g0187 265 PANTHER RHOMBOID-LIKE PROTEIN 13 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0187 Lan-Chr7 1145275 1146707 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0187 - - gmx:100818954 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0187 7 1145275 1146707 Lan8g1767 8 24336144 24337870 LSH
Lan7g0187 7 1145275 1146707 Lan13g0277 13 1765979 1767425 LSH