Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0277 ATGGGGAAGCCTCTGTTTTATGAGATCTTGGAAAAACCAGCCACAAGTTGTATCATAGGAATATGCAGTGCTATTTGGTTCTACATTCAGAAGAAAAATATTGGGTATTCACATGTGGGTCTGAGTTATGAGACTGCAATTGAGGGACATTATTGGAGAATCATCACCTCTGCATTTTCACATATAAGTGCTATTCATCTTGTTTTTAACATGAGTGCACTTTGGAGTCTTGGGGTTGTAGAGCAATTGGATCACATGGGCCTAGGTGTTGGCTACTATTTGCAGTACACACTTGTGATGGTTGTTTTGTCAGGAATGCTGGTTCTGGCAATGTACCACTTATTGATTCAAAGATTCAATATTGAGTATTTTCGCCGAGTGACAGCTGTTGGATACTCTTGTGTTGTTTTTGGCTGGATGACAATTCTTTCTGTGAAGCAACCTTCTTCCAAGTTGGAACTTTTTGGATTCCTTTCTCTTCCTATCAGTTTCGCGCCGTTTGAATCGCTCGTTTTCACCTCAATTATTGTTCCTCAGGCGAGTTTTATCGGCCATTTGTCAGGGATTGTTGTCGGATATGCTATAGCGTGGGGTTTGATTCATGGGATGAATAGCTACTGGGCGCTTTCATTATTGAGTTGGATTGCACTTGTCTTTGTTTGGAGTTTGAAGAAATCTGGTGCTGTTGACCTCAACTTTCTCGAGATTGAATCTGTAACTGATCCTTCCTTACCGGTACGGTTTTTGGCATCAGGTAATGGAAGAACACTGCAGATGACTGCATTGCCCAATGGAAATGTTGACATTGTCTGA 813 0.4133 MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHYWRIITSAFSHISAIHLVFNMSALWSLGVVEQLDHMGLGVGYYLQYTLVMVVLSGMLVLAMYHLLIQRFNIEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLVFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMNSYWALSLLSWIALVFVWSLKKSGAVDLNFLEIESVTDPSLPVRFLASGNGRTLQMTALPNGNVDIV* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0277 270 PANTHER RHOMBOID-LIKE PROTEIN 13 1 270 - -
Lan13g0277 270 Gene3D - 10 198 IPR035952 -
Lan13g0277 270 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Lan13g0277 270 PANTHER RHOMBOID PROTEASE 1 270 - -
Lan13g0277 270 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0277 Lan-Chr13 1765979 1767425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0277 - - gmx:100818954 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0187 7 1145275 1146707 Lan13g0277 13 1765979 1767425 LSH
Lan8g1767 8 24336144 24337870 Lan13g0277 13 1765979 1767425 LSH