Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0176 ATGAAAAACGCAAGAGTTGGAAGTGGCACCATGTTAGTAGAAGATCAAAACGCGTATCACAGAAAAAAACTTGTAGCCATTATTTTGAACTCCGATCCAACGTCCCTCTATGACGACGATGACTTCTCAAACCAACGTCATAGCATTGCCACCGCCACAACAACCGGTAGTAGCAACAATACCTCTCCTTTGATTATGTCACCATGGAACCAAGACTCTTCATCTCCATGGTCTTCAATCGCTTCTGCTATCAACCACTACGACGACAACGGCGACAGCAACCGCAACAACTTGGAAAACGACCTCATCGGATCCCTTGTTCGTGAAGAGGGACACATATACTCATTGGCGGTTTCGGGGGACTTGTTGTACACGGGTTCAGACAGCAAGAATATTAGGGTTTGGAAACATATGAACGACTACACGGGTTTCAAATCAAGCAGTGGCTTGATCAAAACAATTGTTATCTCCAATGAGAAAATCTTCACTGGTCATCGAGATGGAAAGATCCGTGTTTGGAAGGCCTCAAATAAGAACCCTAGAAGGTACAAACGCGTTGGAAGCTTGCCTAAATTCAAAGACTACGTCAAGAGTTCAATGAATCCAAAGAATTACGTCGAAGTCCGTCCGAAACGAAACGCGGTAAAGGTGAAGCACTTCGATGCCGTTTCGAGTTTAAGCTTGGACGAGGAAGAAGGGTTGTTGTACTCAGGGTCGTGGGATAAAACTCTCAAGGTTTGGCGCGTGTCTGATTCAAAGTGCGTGGAGTCAATTCAAGCTCACGATGATTCGGTCAACGCAGTTGTGTCAGCGTTGGGGGGAATCGTGTTCACTGGTTCAGCGGACGGAACGGTAAAGATGTGGAAGAGAGAATCAAAGGGAAAGAAAACGAAGCACGAGTTAGATAGAATTCTCTTGAAACAAGAAAACGCTGTGACTTCTTTGGCAGTTAACAGTTTATCAACGGTTATTTATTGCGGTTCCTCTGACGGGTTGGTTAACTACTGGGATCGTGATTTTAAGAACAACGAACTCACTCACGGCGGCGTATTGAACGGCCACAACCTCGCGGTGCTGTGTCTGGCGGCGGCGGGGAGCAATCTTGTTTTCAGTGGGTCCGCAGATAAGAATGTTTGTGTCTGGAAACGAGAGGAGAGTGGGTCCCACTCATGCCTTTCGGTTTTGACGGGCCACACGGGACCGGTTAAGTGCATCGCGGTTCAGGAAGAACCTGAGCGATGTAACGACGGCGTTCAGCGCTGGACGGTTTACACTGGGAGTTTGGATAAGTCGGTGAAGGTGTGGCGCGTGAATGACCACGTGCCTGATAAGAAGAGGATCCAAATCTGGGAAGATAGTGCTAAAACCTGCAAGTGA 1377 0.4742 MKNARVGSGTMLVEDQNAYHRKKLVAIILNSDPTSLYDDDDFSNQRHSIATATTTGSSNNTSPLIMSPWNQDSSSPWSSIASAINHYDDNGDSNRNNLENDLIGSLVREEGHIYSLAVSGDLLYTGSDSKNIRVWKHMNDYTGFKSSSGLIKTIVISNEKIFTGHRDGKIRVWKASNKNPRRYKRVGSLPKFKDYVKSSMNPKNYVEVRPKRNAVKVKHFDAVSSLSLDEEEGLLYSGSWDKTLKVWRVSDSKCVESIQAHDDSVNAVVSALGGIVFTGSADGTVKMWKRESKGKKTKHELDRILLKQENAVTSLAVNSLSTVIYCGSSDGLVNYWDRDFKNNELTHGGVLNGHNLAVLCLAAAGSNLVFSGSADKNVCVWKREESGSHSCLSVLTGHTGPVKCIAVQEEPERCNDGVQRWTVYTGSLDKSVKVWRVNDHVPDKKRIQIWEDSAKTCK* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0176 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 258 289 IPR001680 GO:0005515
Lan7g0176 458 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 13 451 IPR045182 -
Lan7g0176 458 PRINTS G protein beta WD-40 repeat signature 235 249 IPR020472 -
Lan7g0176 458 PRINTS G protein beta WD-40 repeat signature 276 290 IPR020472 -
Lan7g0176 458 PRINTS G protein beta WD-40 repeat signature 423 437 IPR020472 -
Lan7g0176 458 CDD WD40 110 436 - -
Lan7g0176 458 Pfam Nucleoporin Nup120/160 107 261 - -
Lan7g0176 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 351 382 IPR001680 GO:0005515
Lan7g0176 458 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 216 253 - -
Lan7g0176 458 SUPERFAMILY WD40 repeat-like 100 442 IPR036322 GO:0005515
Lan7g0176 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 305 337 IPR001680 GO:0005515
Lan7g0176 458 Gene3D - 209 299 IPR015943 GO:0005515
Lan7g0176 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 216 257 IPR001680 GO:0005515
Lan7g0176 458 MobiDBLite consensus disorder prediction 51 70 - -
Lan7g0176 458 PANTHER EN/SPM-LIKE TRANSPOSON PROTEIN-LIKE 13 451 - -
Lan7g0176 458 SMART WD40_4 298 337 IPR001680 GO:0005515
Lan7g0176 458 SMART WD40_4 99 136 IPR001680 GO:0005515
Lan7g0176 458 SMART WD40_4 344 382 IPR001680 GO:0005515
Lan7g0176 458 SMART WD40_4 388 436 IPR001680 GO:0005515
Lan7g0176 458 SMART WD40_4 209 248 IPR001680 GO:0005515
Lan7g0176 458 SMART WD40_4 137 174 IPR001680 GO:0005515
Lan7g0176 458 SMART WD40_4 251 289 IPR001680 GO:0005515
Lan7g0176 458 Pfam WD domain, G-beta repeat 349 382 IPR001680 GO:0005515
Lan7g0176 458 Pfam WD domain, G-beta repeat 390 435 IPR001680 GO:0005515
Lan7g0176 458 Gene3D - 300 457 IPR015943 GO:0005515
Lan7g0176 458 Gene3D - 91 196 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0176 Lan-Chr7 1080256 1082128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0176 155 423 Acyl Lipid Metabolism Gene Families AT3G18860 29.392 4.63e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0176 - - lang:109355444 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0176 7 1080256 1082128 Lan13g0266 13 1676614 1678547 LSH