Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0165 ATGGAGATCGATTTCAATGAATACCAATTACGCTGTGAACTCCATGGCCACGAAGACGATGTTCGTGGAATATGCGTGTGCGGCAACGATGGCATAGCGACTTCGTCCAGGGATCGAACGGTCAGGTTTTGGTCTCTGGATTCTTCTGATAAGCGAAAGTTCGCGTGTTCCAAAATTCTGTTAGGGCACTCTAGTTTTGTGGGACCCTTGGTTTGGATTTCGCCAAATCAAGAGTTCCCACAAGGTGGAATTGTGTCTGGTGGCATGGATACTCTTGTGTTGGTGTGGGATTTGAAAACTGTGGAGAAGGTTCACACACTCCAGGGCCATAAATTGCAAGTTACTGGCATTGCATTGGATGATAATGGAGATATCATATCTTCTTCTGTTGATTGCACCTTGAGACGGTGGAGGAATGGGCAATCTTTAGAGACATGGGAGGCTCATAAAGCACCAATCCAAGCAGTTATAAAGCTACCCTCCGGCGACGGCGAGATTGTTACAGGTTCAAGTGACTCTACTTTAAAGCTTTGGAAAGGAAAAACTTGTTTACACACTTTTGATGGACATGCAGATACAGTTCGAGGCTTGGCTGTGATGCCTGGTCTTGGAATCTTATCCGCGTCACATGATGGCTCTCTCAGATTATGGGCAGTAAGTGGCGAAGTGTTAATGGAGATGGTTGGTCACACTGCAATTGTTTATTCAGTTGACTCACATTCATCAGGACTTATTGTCAGTGGCAGCGAAGATCGTTTTGCAAAAATATGGAAAGATGGAGTTTGTGTTCAGAGCATAGAACATCCTGGTTGTGTTTGGGATGCAAAATTCCTGGAAAATGGGGATATTGTGACGGCATGTTCAGATGGAACTGTACGCATTTGGACCACACATCAGGATACTGTTGCTGACCAACTAGAGCTTGATTTATACACTTCACAACTTTCTCAATACAAGGCTAGTAGAAAGAGGGTTGGAGGATTGAAACTGGAAGAGTTACCAGGCTTGGATTCACTGAAGATCCCAGGGACTAGTGATGGCCAAACAAAAATAGTCAGGGAGGGGGATAATGGGGTGGCATATGCATGGAACATGTCAGAACAGAAGTGGGATAAAATTGGCGAAGTTGTTGATGGACCGGAGGAATCAAGTCGTCCTTTCCATGATGGTGCTCAGTATGACTACGTGTTTGATGTGGATATTGGAGATGGTATGCCTATCCGTAAGTTGCCATACAATCGATCAGATAATCCATATGACGTCGCTGACAAATGGCTACTCAAGGAGAGTCTCCCTCTTTCCTTCCGTGAACAAATCGTACAGTTCATACTTCAAAATACTGGACAAAAGGATATTACTTTTGATGCTTCATTTCGTGATCCCTATACCGGCTCCAATGCTTATGTACCAGGACAATCTTCACATGTGTCTGATATTTCTGCAAAACCTACTTTCAAGCATATTCCTAAGAAAGGGATGCTTGTTTTTGAGGCAGCTCAGTTTGATGGGATCCTTAAAAAGATTAATGAGTTCAATAATGCTTTACTATCTGACCAGGAAACGCAGAACTTGTCTTTGACTGAGCCTGATGTTTCCAGACTGGGTTCCATTGTTAAAACTCTGAAAGATACTTCGTATTACCATTCTAGTAAATTTGCAGACTCTGATATCACTTTGTTGCTGAATTTACTTCAGTCATGGCCAATAGGAATGATATTTCCTGTCATTGATATTTTAAGGATGGCAGTTCTTCATCCAGATGGGGCTACTAAACTTCACAAGCAATTAGAAGCTAAAAATGATATACTAATGGAAGTGATTAAGAAAGTCACAAAAAATCCGGCAATTCCTGCAAATTTGTTGACCAGCATTCGTACTATAACTAATCTCTTTAAGAATTCATGCTACTACAACTGGTTGCAAAAACACTGCAGTGAGATTCTTGATGCTTTCTCAAGTTGTAGTTCATCGTCAAACAAAAACTTGCACTTGTCCTATTCTACCTTGATACTCAATTACACTGTGCTATTGATTGAATTGAAGGATCAAGAAGGTCAATCTCAAGTTTTATCAGCAGCACTTGAGATTGTCGAAAATGAAAATGTAGAAGGAGATTCCAAATTCCGTGCATTAGTTGGTATTGGATCACTGATGCTTGAGGGTCTTGTAAAAAAAATAGCACTGGACTTTGATGTTTTGAACTTTGCAAAATCAGCCAAGGGTTCTAAGGAAGCCAAAATAGCTGAAGTTGGATCTGACATTGAGCTGTTAACAAAGCAGAGTTGA 2286 0.4147 MEIDFNEYQLRCELHGHEDDVRGICVCGNDGIATSSRDRTVRFWSLDSSDKRKFACSKILLGHSSFVGPLVWISPNQEFPQGGIVSGGMDTLVLVWDLKTVEKVHTLQGHKLQVTGIALDDNGDIISSSVDCTLRRWRNGQSLETWEAHKAPIQAVIKLPSGDGEIVTGSSDSTLKLWKGKTCLHTFDGHADTVRGLAVMPGLGILSASHDGSLRLWAVSGEVLMEMVGHTAIVYSVDSHSSGLIVSGSEDRFAKIWKDGVCVQSIEHPGCVWDAKFLENGDIVTACSDGTVRIWTTHQDTVADQLELDLYTSQLSQYKASRKRVGGLKLEELPGLDSLKIPGTSDGQTKIVREGDNGVAYAWNMSEQKWDKIGEVVDGPEESSRPFHDGAQYDYVFDVDIGDGMPIRKLPYNRSDNPYDVADKWLLKESLPLSFREQIVQFILQNTGQKDITFDASFRDPYTGSNAYVPGQSSHVSDISAKPTFKHIPKKGMLVFEAAQFDGILKKINEFNNALLSDQETQNLSLTEPDVSRLGSIVKTLKDTSYYHSSKFADSDITLLLNLLQSWPIGMIFPVIDILRMAVLHPDGATKLHKQLEAKNDILMEVIKKVTKNPAIPANLLTSIRTITNLFKNSCYYNWLQKHCSEILDAFSSCSSSSNKNLHLSYSTLILNYTVLLIELKDQEGQSQVLSAALEIVENENVEGDSKFRALVGIGSLMLEGLVKKIALDFDVLNFAKSAKGSKEAKIAEVGSDIELLTKQS* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0165 761 ProSiteProfiles Trp-Asp (WD) repeats profile. 227 258 IPR001680 GO:0005515
Lan7g0165 761 PANTHER PHOSPHOLIPASE A2-ACTIVATING PROTEIN 4 758 - -
Lan7g0165 761 ProSiteProfiles Trp-Asp (WD) repeats profile. 84 106 IPR001680 GO:0005515
Lan7g0165 761 CDD WD40 10 295 - -
Lan7g0165 761 Gene3D - 380 455 IPR038122 -
Lan7g0165 761 Pfam PFU (PLAA family ubiquitin binding) 342 450 IPR015155 -
Lan7g0165 761 ProSiteProfiles Trp-Asp (WD) repeats profile. 146 179 IPR001680 GO:0005515
Lan7g0165 761 Coils Coil 593 613 - -
Lan7g0165 761 Gene3D - 486 757 IPR011989 -
Lan7g0165 761 PANTHER PHOSPHOLIPASE A-2-ACTIVATING PROTEIN 4 758 - -
Lan7g0165 761 PRINTS G protein beta WD-40 repeat signature 32 46 IPR020472 -
Lan7g0165 761 PRINTS G protein beta WD-40 repeat signature 166 180 IPR020472 -
Lan7g0165 761 PRINTS G protein beta WD-40 repeat signature 205 219 IPR020472 -
Lan7g0165 761 ProSiteProfiles PUL domain profile. 486 757 IPR013535 -
Lan7g0165 761 Coils Coil 680 700 - -
Lan7g0165 761 ProSiteProfiles Trp-Asp (WD) repeats profile. 14 54 IPR001680 GO:0005515
Lan7g0165 761 ProSiteProfiles PFU domain profile. 362 457 IPR015155 -
Lan7g0165 761 Pfam PUL domain 488 753 IPR013535 -
Lan7g0165 761 Pfam WD domain, G-beta repeat 140 179 IPR001680 GO:0005515
Lan7g0165 761 Pfam WD domain, G-beta repeat 103 137 IPR001680 GO:0005515
Lan7g0165 761 Pfam WD domain, G-beta repeat 12 45 IPR001680 GO:0005515
Lan7g0165 761 Pfam WD domain, G-beta repeat 261 295 IPR001680 GO:0005515
Lan7g0165 761 Pfam WD domain, G-beta repeat 223 258 IPR001680 GO:0005515
Lan7g0165 761 Pfam WD domain, G-beta repeat 182 217 IPR001680 GO:0005515
Lan7g0165 761 ProSiteProfiles Trp-Asp (WD) repeats profile. 187 217 IPR001680 GO:0005515
Lan7g0165 761 SUPERFAMILY WD40 repeat-like 5 307 IPR036322 GO:0005515
Lan7g0165 761 SMART WD40_4 220 258 IPR001680 GO:0005515
Lan7g0165 761 SMART WD40_4 100 138 IPR001680 GO:0005515
Lan7g0165 761 SMART WD40_4 259 296 IPR001680 GO:0005515
Lan7g0165 761 SMART WD40_4 180 218 IPR001680 GO:0005515
Lan7g0165 761 SMART WD40_4 7 45 IPR001680 GO:0005515
Lan7g0165 761 SMART WD40_4 139 179 IPR001680 GO:0005515
Lan7g0165 761 SMART WD40_4 53 97 IPR001680 GO:0005515
Lan7g0165 761 Gene3D - 4 313 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0165 Lan-Chr7 1004718 1015967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0165 1 760 Acyl Lipid Metabolism Gene Families AT3G18860 70.959 0.0 1155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0165 K14018 - gmx:100816481 1305.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0165 7 1004718 1015967 Lan13g0251 13 1583977 1596202 LSH