Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0157 ATGGCTCAGCCACTCGTGAAGAAAGACGATGACCGTGACGATGAAGATGAGTATTCCCCATTTTTGGGAATTGAAAAGGGGGCTGTTCTTCAGGAGGCCAGGGTTTTTAATGACCCACAACTCGATGCCAGGAGATGTTCACAGGTTATCACAAAACTTTTATACCTGCTGAATCAGGGAGAGTCATTTACAAAGGTCGAAGCCACAGAAGTGTTCTTTTCGGTGACTAAACTTTTCCAGTCTCGCGATCTTGGGTTAAGAAGAATGGTCTACTTGATTATTAAGGAACTCTCCCCCTCGGCTGATGAGGTTATTATCGTTACAAGCTCTCTCATGAAGGACATGAATAGTAAGACTGATATGTATAGGGCAAATGCCATTCGTGTGCTCTGTCGTATCACGGATGGAACCCTCCTTACCCAAATTGAACGGTATTTGAAACAAGCAATTGTAGATAAGAATCCAGTTGTTGCAAGTGCAGCCCTAGTTAGTGGCATTCATATTCTCCAGACCAATCCTGAGATTGTAAAAAGGTGGAGCAATGAGGTCCAGGAAGCTGTTCAATCAAGAGCAGCTCTTGTACAATTTCATGCCCTGGCTTTGCTACATCAGATACGGCAAAATGATCGATTAGCTGTTAGCAAGCTGGTTACCAGCTTGACAAGGGGGACTGTTCGCTCACCTTTGGCTCAATGCCTTCTGATCCGTTATACAAGTCAGGTCATTCGTGAGTCAGGGAATAATAATACACAATCCGGGGACCGTCTCTTCTATGATTATCTTGAGAGTTGCCTTCGGCACAAGTCAGAGATGGTGATTTTTGAAGCTGCCAAGGCAATTACAGAGCTCAATGGCGTAACAAGCCGGGAATTAACTCCAGCTATTACTGTTCTTCAGCTCTTTTTAAGTTCTTCTAAGCCAGTCTTGAGATTTGCTGCTGTCCGCACTTTGAACAAGGTGGCAATGACACACCCAATGGCAGTCACTAACTGCAACATTGATATGGAAAGTTTAATCTCTGACCAAAACAGAAGCATTGCTACACTTGCTATTACTACTCTCTTGAAGACAGGAAATGAATCAAGTGTGGACCGTCTTATGAAGCAGATCACAAATTTCATGTCTGATATTGCTGATGAGTTCAAAATTGTTGTTGTTGAAGCAATAAGATCGTTATGTTTGAAGTTCCCATTAAAATATAGATCTCTGATGAACTTCTTGAGTAGCATTCTCAGGGAAGAAGGTGGATTCGATTACAAGAAAGCAATTGTAGATTCAATTGTTATTCTTATTAGAGACATTCCTGATGCAAAGGAAAGTGGGTTGCTTCATTTGTGTGAATTCATTGAAGATTGTGAATTCACTTATTTGTCCACACAGATACTGCACTTCCTGGGAGTTGAAGGGCCAAAAACATTAGACCCCAGCAAATATATTCGTTATATCTATAACAGAGTGCATCTTGAGAATGCAACTGTCAGGGCCAGTGCTGTGAGCACACTGGCTAAGTTTGGTGCTGCAGTTGATGGATTGAAGCCTCGCGTATTTGTTCTCCTAAGGCGATGTCTTTTTGACAATGACGATGAGGTTCGTGATAGGGCAACACTTTATCTGAACACACTTGGAGGTGATGGTTCAGTTGTTGAGACTGATAAAGATGTGAAGGACTTCCTCTTTGGGTCATTTGATATTCCACTTGTCAATCTAGAGACTAGTTTGAAAAATTATGAGCCTTCTGAAGAGGCTTTTGACATTAACTCGGTGCCCAAGGTGGTCAAGTCTCAGCCACTTGCAGAGAAGAAAGCCGCAGGTAAAAAGGCAACTGGTTTGGGTGCTCCTCTTAGTGCTCCCCCATCTACTGCAGATGCATATGAAAGACTGCTGTTGTCCATTCCTGAGTTTGCAAATTTTGGGAAGCATTTTAAGTCCTCACCGCCTGTGGAGCTTACTGAAGCAGAGACAGAATATGCAGTTAATGTTGTTAAACACATTTTTGATAGGCATGTTGTGTTTCAGTACAACTGCACAAACACGATACCAGAACAGTTATTGGAAGATGTTATTGTAATTGTGGATGCATCAGAAGCAGAGGAATTTTCTGAGGTTTTCGCCAAGCCTCTCCGATCTCTTCCTTATGATTCACCTGGGCAGACTTTTGTGGCATTTGAGAAGCCTGAGGGACTGCCAACAGCTGGAAAATTTTCTAACATTCTGAAATTTATTGTCAAAGAGGTTGACCCAACCACTGGCGAGGCAGATGATGATGGTGTTGAAGATGAATACCAGCTTGAGGATCTGGAGGTTGTTGCAGCAGATTACATACTGAAAGTGGGGGTGTCTAATTTCAGGAATGCATGGGAAAGCATGGACCCTGATTCTGAACGAGTGGATGAATATGGTCTCGGCCCAAGGGAGAACTTGGCTGAAGCTGTAAATACAGTCATTAATCTTCTAGGAATGCAGCCTTGTGAGGGCACCGAAGTTGTTCCACCCAATTCAAGGTCACACACATGCTTGTTGTCCGGTGTATTCATCGGAAATGTGAAGGTGCTTGTGCGGTTGTCTTTTGGACTTGATGGTCCGAAGGATGTTGCAATGAAACTGTCTGTCAGATCCGAGGATGAAGCTGTCAGCGATGCCATTCATGAGATTGTGGCTAGCGGCTAG 2667 0.4327 MAQPLVKKDDDRDDEDEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGESFTKVEATEVFFSVTKLFQSRDLGLRRMVYLIIKELSPSADEVIIVTSSLMKDMNSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHILQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVIRESGNNNTQSGDRLFYDYLESCLRHKSEMVIFEAAKAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSSILREEGGFDYKKAIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGVEGPKTLDPSKYIRYIYNRVHLENATVRASAVSTLAKFGAAVDGLKPRVFVLLRRCLFDNDDEVRDRATLYLNTLGGDGSVVETDKDVKDFLFGSFDIPLVNLETSLKNYEPSEEAFDINSVPKVVKSQPLAEKKAAGKKATGLGAPLSAPPSTADAYERLLLSIPEFANFGKHFKSSPPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLEDVIVIVDASEAEEFSEVFAKPLRSLPYDSPGQTFVAFEKPEGLPTAGKFSNILKFIVKEVDPTTGEADDDGVEDEYQLEDLEVVAADYILKVGVSNFRNAWESMDPDSERVDEYGLGPRENLAEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGNVKVLVRLSFGLDGPKDVAMKLSVRSEDEAVSDAIHEIVASG* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0157 888 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 773 885 IPR009028 GO:0006886|GO:0016192|GO:0030117
Lan7g0157 888 SUPERFAMILY ARM repeat 28 562 IPR016024 -
Lan7g0157 888 Gene3D - 23 317 IPR011989 -
Lan7g0157 888 PANTHER COATOMER SUBUNIT GAMMA 1 888 - -
Lan7g0157 888 Gene3D - 770 886 IPR012295 -
Lan7g0157 888 PIRSF Gamma-COP 7 886 IPR017106 -
Lan7g0157 888 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 771 885 IPR032154 -
Lan7g0157 888 Gene3D Coatomer, gamma subunit, appendage domain 616 769 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Lan7g0157 888 SUPERFAMILY Clathrin adaptor appendage domain 618 772 IPR013041 -
Lan7g0157 888 PANTHER COATOMER SUBUNIT GAMMA 1 888 IPR017106 -
Lan7g0157 888 Pfam Adaptin N terminal region 29 541 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lan7g0157 888 Pfam Coatomer gamma subunit appendage platform subdomain 623 768 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0157 Lan-Chr7 953413 959526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0157 K17267 - gmx:100789362 1617.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0157 7 953413 959526 Lan8g1785 8 24451300 24457514 LSH
Lan7g0157 7 953413 959526 Lan13g0242 13 1498102 1504429 LSH