Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0141 ATGTCCAATCAATTCGATCGTTTCGCCATACCTTGCTTTGATGGGGATGTGAAAAAGGAAAGGAGATTTGATTTTGAGAACGATGAGGATGAAAGGAGGAATAAAATTGGGAATCTAAAAAAGAAAGCCATCAATGCATCTTCCAAATTCAAGCATTCTCTAAAGAATAAGAACTCCAGGAGGAAGAGTGATGGTCGTGTTTGCTCCATTTCCATCGAGGATGTTCGGGATGTCGAGGAGCTGCAGGCTGTTGATGCATTTCGCCAGTCATTGATTTTGGATGAATTGCTTCCAGAAAAACATGATGATTACCATATGATGTTAAGATTTCTGAAAGCAAGGAAGTTTGACATTGAAAAAGCAAAGCATATGTGGGCTGATATGCTACAATGGAGGAAAGATTTTGGTGCCGACACTATTATGGAGGATTTTGAGTTCAAAGAAATAGATGAAGTTGTAAAGCATTATCCGCAAGGCTATCATGGTGTTGATAAGGAGGGCAGGCCTGTTTACATTGAAAGACTTGGAAAAGTTGATCCAAACAAACTGATGCAAGCTACCACTTTGGATAGATATGTAAAATACCATGTACAGGAGTTTGAGAAAACTTTTGCGACAAAGTTTCCTGCTTGTACAATAGCTGCCAAAAAGCACATAGATTCAAGCACCACAATCTTAGATGTTCAAGGCGTGGGCCTTAAAAACTTTTCAAAGACTGCCCGGGAACTGCTTATGCGAATACAGAAGATTGATGGTGACAATTACCCTGAGACGCTGTCCCAAATGTTTCTCATAAATGGTGGCCCTGGATTTAGGTTGCTTTGGAACACTGTCAAGTCTTTTCTTGATCCCAAAACAGCTTCAAAGATTCATTTTCTCGGAACCAAGTACCAAAGCAAACTGCTTGAAATAATTGATGCCAGTGAGTTGCCAGAATTTCTGGGAGGCACCTGCACTTGTGCGGATCATGGAGGTTGTCTAAGATCTGATAAAGGGCCATGGAAAAACCCTGAAATATTGAAGATGATCATGAGTGATGAAGCACGGCGCCCAAGGCAGGTAGTAAAAGTTCAAAACAGTGATGGAAAGGTTATTGCATATGCCAAACCAGGACACCCGATGGGAAAAGGCAGTGATACATCCACAGCTGAATCAGGGTCCGAAGTTGAAGATATAGCTTCTCCAAAAGCAGCGCATAATTACTCGCACCTTAAGTTGACCCCAGTTCACGAGGAAGCTAAGGTAGTTGGAAAGTCAAGCTATGCTGCTAGCGGTAACCTATCTGGGGATGATGAATATGTTCCAATGGTGGACAAAGCTGTTGATGCTGTTTGGACGAAGCAAGCTCCACTCCAGTGGTCTCACGCTTCAAAAGCAGCACCTCCCCCTCTTGACACTCCAAAATCTCCAGAAGGGATTCGAGCTCGGATTTGGATCGCCCTGACTGTCTTCTTTTTGTCTCTATTTACTCTCTTTGGTTCATTCACTAGCCGTGTGACCAAAAAGCTTCCTGCAGAGTCATCTAATGATTGTCAGGGCACTTTAGAGCCAACTTCTGATGCAACAAACAAGGATGATGTGCATCCTGCTTCACCTACTCCAGCACATACTGAGGAAAATCCCCATTCCTCCATGATGAAAAGGTTATGCGAGCTTGAAGAGAAGGTTGACACACTCAAATCTAAGCCACCTGAAATGCCTTACGAGAAAGCGGAACTGCTAAATGCTGCCGTCTGCCGGGTGGATGGTTTGGAAGCAGAGTTAATTGCAACTAAAAAGGCTCTCTATGAGGCATTAATAAGGCAAGAAGAGCTGCTTGCTTATATTGATAGCCAAGAAGAAGCTAGATCACGAGTAAGAAGAAGTTTTTTTGCTGGTGAGTTTTTGCTGATAGACTCTGGAGGAGTGTTTGTGAGGAGTGTTGACCTTGCATCTGATGTAAACTCTGAACAAAGTTTTATAATTATACTGATTAAATTTCATGAAGAATTACTTCAAATGTTTGTATAG 2010 0.4224 MSNQFDRFAIPCFDGDVKKERRFDFENDEDERRNKIGNLKKKAINASSKFKHSLKNKNSRRKSDGRVCSISIEDVRDVEELQAVDAFRQSLILDELLPEKHDDYHMMLRFLKARKFDIEKAKHMWADMLQWRKDFGADTIMEDFEFKEIDEVVKHYPQGYHGVDKEGRPVYIERLGKVDPNKLMQATTLDRYVKYHVQEFEKTFATKFPACTIAAKKHIDSSTTILDVQGVGLKNFSKTARELLMRIQKIDGDNYPETLSQMFLINGGPGFRLLWNTVKSFLDPKTASKIHFLGTKYQSKLLEIIDASELPEFLGGTCTCADHGGCLRSDKGPWKNPEILKMIMSDEARRPRQVVKVQNSDGKVIAYAKPGHPMGKGSDTSTAESGSEVEDIASPKAAHNYSHLKLTPVHEEAKVVGKSSYAASGNLSGDDEYVPMVDKAVDAVWTKQAPLQWSHASKAAPPPLDTPKSPEGIRARIWIALTVFFLSLFTLFGSFTSRVTKKLPAESSNDCQGTLEPTSDATNKDDVHPASPTPAHTEENPHSSMMKRLCELEEKVDTLKSKPPEMPYEKAELLNAAVCRVDGLEAELIATKKALYEALIRQEELLAYIDSQEEARSRVRRSFFAGEFLLIDSGGVFVRSVDLASDVNSEQSFIIILIKFHEELLQMFV* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0141 669 MobiDBLite consensus disorder prediction 503 544 - -
Lan7g0141 669 Pfam CRAL/TRIO domain 154 316 IPR001251 -
Lan7g0141 669 PRINTS Cellular retinaldehyde-binding protein signature 106 128 - -
Lan7g0141 669 PRINTS Cellular retinaldehyde-binding protein signature 275 294 - -
Lan7g0141 669 PRINTS Cellular retinaldehyde-binding protein signature 308 317 - -
Lan7g0141 669 SMART sec14_4 148 319 IPR001251 -
Lan7g0141 669 Pfam CRAL/TRIO, N-terminal domain 100 127 IPR011074 -
Lan7g0141 669 SUPERFAMILY CRAL/TRIO domain 148 342 IPR036865 -
Lan7g0141 669 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8-LIKE 4 621 - -
Lan7g0141 669 MobiDBLite consensus disorder prediction 367 390 - -
Lan7g0141 669 CDD SEC14 149 317 IPR001251 -
Lan7g0141 669 SMART CRAL_TRIO_N_2 103 128 IPR011074 -
Lan7g0141 669 MobiDBLite consensus disorder prediction 503 526 - -
Lan7g0141 669 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 148 322 IPR001251 -
Lan7g0141 669 Gene3D - 136 347 IPR036865 -
Lan7g0141 669 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 4 621 - -
Lan7g0141 669 SUPERFAMILY CRAL/TRIO N-terminal domain 78 144 IPR036273 -
Lan7g0141 669 Gene3D - 72 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0141 Lan-Chr7 853127 863115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0141 82 313 Acyl Lipid Metabolism Gene Families AT5G47730 28.216 6.25e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0141 - - lang:109351490 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0141 7 853127 863115 Lan13g0217 13 1369151 1374343 LSH