Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0217 ATGTCTGGCCCACTCGATCGTTTCGCCAGACCCTGCTTTGAGGGGTTTTCCGGCAGTGATGAGAAAAAGGAAAGGAGATCCGATTTTGAGAACTCTGAGGATGAAAGGAGGACAAAAATTGGATCTTTAAAAAAGAAAGCCCTCAATGCATCTTCCAAATTCAAGCATTCTCTAAAGAAGAAGAGTAGCCGGAGGAAAAGCGATGGCCGTGTTAGCTCTGTTTCCATTGAGGATGTTCGGGATGTCGAGGAGCTGCAGGCTGTTGATGCATTTCGCCAATCCTTGATTATGGATGAATTGCTTCCAGAAAAACATGATGATTACCATATGATGTTAAGATTTCTGAAAGCAAGGAAGTTTGATGTTGAAAAAGCAAAGCATATGTGGGCTGATATGCTACAATGGAGGAAGGAGTTTGGTGTTGACACTATTTTGGAGGATTTTGAGTTCAAAGAGCTGGATGAAGTTTTAAAGCATTATCCGCATGGCTATCACGGTGTTGATAAGGAGGGCAGACCTGTTTACATTGAAAGACTGGGAAAAGTAGATACAAACAAACTGATGCACGTTACAACTATGGATAGATATGTAAAGTACCATGTACAGGAGTTTGAGAAAACTTTTGCGGTAAAGTTTCCTGCTTGCGCAATAGCTGCCAAACGGCACATAGACTCAAGCACCACAATCTTAGATGTTCAAGGCGTGGGCCTTAAGAACTTTTCGAAGTCTGCACGGGAACTACTCATGCGTATACAGAAGATTGATGGTGACAATTACCCTGAGACACTGTGCCAAATGTTTCTCATAAATGGTGGCCCGGGATTTAGGTTGCTTTGGAACACTGTCAAGTCTTTTCTTGATCCAAAAACAGCTTCAAAGATTCATTTTCTCGGAACCAAGTACCAAAGCAAATTGCTCGAAATAGTTGATGCCAGTGAGTTGCCAGAATTTTTGGGAGGTACCTGCACTTGTGCGGATCAGGGAGGTTGTCTCAGATCTGATAAAGGGCCATGGAAAAACCCTGAAATATTGAAGATGATTCTGAGTGGCGAAGCACGGCGCCCAAGGCAGGTAGTAAAAGTTTTAAACAGTGACGGAAAGGTTATTGCCTATGCCAAACCACGATACCCAATGGTAAAAGGCAGTGATACATCCACAACTGAATCAGGGTCTGAAGCTGAAGATATAGCTTCTCCAAAAGCGGTGCATAATTACTCACACCTTAGGTTGACTCCTGTTCGTGAGGAAGCTAAGGTAGTTGGACAGTCAAGCTATGCTGCTAGTGGTAACCTATCCGGGTATGATGAATATGTTCCAATGGTGGACAAAGCTGTTGATGCTGTTTGGAAGAAGCAAGCTTCACTCCAGAGGTCTCATACTTCAAAAGGAACACCTCCCCTTCTTGACACTCCAAAAATTCCAGAAGGACTTCTTGCTCGGATCTGGGTAGCCCTGACTTTCTTCGTTCTGACTCTATTTACTCTCTTCCGTTCATTCACAAGCCGTGTGACCAAGATGCCTCCCGCCATATCATCTAATGATTGCCCAGGCCCTTCCGAGTCAACTTCTGATGCAACAAACAAGGAAGATGGCCATCCTCCGTCACCAACTCCAGCACATACTGAGGCAAATGTCCTTTCCTCCATGATGAAAAGGTTAAGTGAGCTTGAAGAAAAGGTTGACACACTCCAATCTAAGCCATCTGAGATGCCTAATGAGAAAGCAGAATTGCTAAATGCTGCTGTCTGCCGGGTGGATGCTTTGGAAGCAGAGTTAATTGCAACTAAAAAGGCTCTCTATGAAGCGTTAATGAGGCAAGAAGAGCTGCTTGCTTATATTGATAGGCAAGAAGAAGCTAAATTTCGGAAGAAGAAGAAGTTGTTTTGCTGGTGA 1893 0.4379 MSGPLDRFARPCFEGFSGSDEKKERRSDFENSEDERRTKIGSLKKKALNASSKFKHSLKKKSSRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPEKHDDYHMMLRFLKARKFDVEKAKHMWADMLQWRKEFGVDTILEDFEFKELDEVLKHYPHGYHGVDKEGRPVYIERLGKVDTNKLMHVTTMDRYVKYHVQEFEKTFAVKFPACAIAAKRHIDSSTTILDVQGVGLKNFSKSARELLMRIQKIDGDNYPETLCQMFLINGGPGFRLLWNTVKSFLDPKTASKIHFLGTKYQSKLLEIVDASELPEFLGGTCTCADQGGCLRSDKGPWKNPEILKMILSGEARRPRQVVKVLNSDGKVIAYAKPRYPMVKGSDTSTTESGSEAEDIASPKAVHNYSHLRLTPVREEAKVVGQSSYAASGNLSGYDEYVPMVDKAVDAVWKKQASLQRSHTSKGTPPLLDTPKIPEGLLARIWVALTFFVLTLFTLFRSFTSRVTKMPPAISSNDCPGPSESTSDATNKEDGHPPSPTPAHTEANVLSSMMKRLSELEEKVDTLQSKPSEMPNEKAELLNAAVCRVDALEAELIATKKALYEALMRQEELLAYIDRQEEAKFRKKKKLFCW* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0217 630 MobiDBLite consensus disorder prediction 16 42 - -
Lan13g0217 630 Gene3D - 140 350 IPR036865 -
Lan13g0217 630 SUPERFAMILY CRAL/TRIO domain 152 345 IPR036865 -
Lan13g0217 630 Pfam CRAL/TRIO domain 158 320 IPR001251 -
Lan13g0217 630 SMART sec14_4 152 323 IPR001251 -
Lan13g0217 630 MobiDBLite consensus disorder prediction 1 70 - -
Lan13g0217 630 MobiDBLite consensus disorder prediction 49 66 - -
Lan13g0217 630 SUPERFAMILY CRAL/TRIO N-terminal domain 82 148 IPR036273 -
Lan13g0217 630 CDD SEC14 153 321 IPR001251 -
Lan13g0217 630 Gene3D - 69 139 - -
Lan13g0217 630 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Lan13g0217 630 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Lan13g0217 630 PRINTS Cellular retinaldehyde-binding protein signature 312 321 - -
Lan13g0217 630 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Lan13g0217 630 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 628 - -
Lan13g0217 630 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Lan13g0217 630 Coils Coil 546 566 - -
Lan13g0217 630 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8 3 628 - -
Lan13g0217 630 MobiDBLite consensus disorder prediction 507 530 - -
Lan13g0217 630 Pfam CRAL/TRIO, N-terminal domain 103 131 IPR011074 -
Lan13g0217 630 MobiDBLite consensus disorder prediction 507 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0217 Lan-Chr13 1369151 1374343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0217 86 317 Acyl Lipid Metabolism Gene Families AT5G47730 29.630 1.48e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0217 - - gmx:100785793 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0141 7 853127 863115 Lan13g0217 13 1369151 1374343 LSH