Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0125 ATGGCCTCTGCATCAGCAACTTTGTTAAAGTCATCAACAATTCTTGACAAATCTGAATGGGTTAAGGGACAATCCCTTCGCCAAGCTTCTATTGTTTCAGTTGCAAGATGCAACTCCATCAACCCATCAGCACTCACCATCAGAGCTGGTTCCTATGCCGATGAACTCGTTAAGACCGCGAAAACAGTTGCTTCACCAGGGCGTGGTATTTTGGCCATGGATGAGTCTAATGCTACAGCTGGGAAGCGTTTGGATTCAATTGGGTTAGAAAACACCGAAGCGAACCGCCAGGCATACCGTACTCTCCTTGTCTCAGCTCCAGGGCTTGGTAATTACATCTCTGGTGCCATTCTTTTCGAGGAAACTCTCTACCAATCCACAGTTGATGGAAAGAAGATCGTCGATGTACTTGTCGAGCAAAACATTGTTCCTGGTATTAAAGTTGACAAGGGTTTGGTGCCCTTGGTTGGTTCCAACGACGAGTCCTGGTGCCAAGGTCTGGACGGTCTTGCATCTCGCACAGCTGCGTACTACCAACAAGGTGCCCGCTTCGCCAAATGGCGTACCGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTGGCAGTTAAGGAAGCAGCGTGGGGTCTAGCTCGCTATGCTGCAATTTCTCAGGACAATGGGTTGGTTCCAATTGTGGAGCCAGAGATCTTGCTTGATGGCGAACATAATATCGAAAGGAATTTCGAAGTCGCGCAAAAGGTCTGGGCTGAAGTTTTCTTCTACCTTGCTGAGAACAATGTTCTGTTTGAGGGCATTCTCCTGAAGCCTAGCATGGTTACTCCTGGAGCCGAGTCAAAGGAGAGGGCAACTCCTCAGCAGGTTGCTGACTACACCCTCAAGCTCCTTCGCCGGAGAGTTCCCTCTGCTGTCCCTGGAATCATGTTCTTATCTGGTGGACAATCTGAGGTTGAAGCAACCCTTAACTTGAATGCCATGAACCAATCCCCGAACCCGTGGCACGTGTCATTCTCATATGCCAGAGCCCTACAGAACACTACATTGAAAACATGGGGAGGTCGCGCCGAGAACGTGAAAGCAGCACAAGATGCACTCCTTTTTCGTGCCAAGTCCAACTCACTGGCTCAGCTTGGAAAGTACACTGGTGAAGGTGAATCTGATGAAGCAAATAAGGAGTTATTCGTCAAAGGATATTCCTACTAA 1200 0.4892 MASASATLLKSSTILDKSEWVKGQSLRQASIVSVARCNSINPSALTIRAGSYADELVKTAKTVASPGRGILAMDESNATAGKRLDSIGLENTEANRQAYRTLLVSAPGLGNYISGAILFEETLYQSTVDGKKIVDVLVEQNIVPGIKVDKGLVPLVGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHNIERNFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKERATPQQVADYTLKLLRRRVPSAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTTLKTWGGRAENVKAAQDALLFRAKSNSLAQLGKYTGEGESDEANKELFVKGYSY* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0125 399 CDD FBP_aldolase_I_a 53 379 - -
Lan7g0125 399 SUPERFAMILY Aldolase 45 399 - -
Lan7g0125 399 Pfam Fructose-bisphosphate aldolase class-I 55 399 IPR000741 GO:0004332|GO:0006096
Lan7g0125 399 Gene3D Aldolase class I 35 398 IPR013785 -
Lan7g0125 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 399 IPR000741 GO:0004332|GO:0006096
Lan7g0125 399 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 260 270 IPR029768 -
Lan7g0125 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0125 Lan-Chr7 748857 751386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0125 52 399 Miscellaneous Gene Families AT3G52930 55.966 2.58e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0125 K01623 - gmx:100818383 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0125 7 748857 751386 Lan8g1814 8 24620937 24623668 LSH
Lan7g0125 7 748857 751386 Lan13g0199 13 1249026 1251673 LSH