Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0199 ATGGCCTCTGCATCTGCAACTCTGCTTAAATCATCACTAGTTCTTGAAAAGTCTGAGTGGGTTAAGGGCCAAAACCTGCGCCAAGTTTCTGCTGTATCTGTTGCAAGATGCAACTCTACCAACCCATCAACCCTTACCATCAGAGCTGGTTCCTATGCTGATGAACTGGTTAAGACCGCGAAAACAGTTGCTTCACCAGGGCGCGGTATTTTGGCGATGGATGAGTCTAATGCTACCGCTGGGAAGCGTTTGGCTTCGATTGGATTAGAGAACACCGAAGCTAATCGCCAAGCATACCGTACCCTCCTTGTGTCAGCTCCAGGGCTTGGTCAGTACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACAGTTGATGGAAAGAAGATTGTAGATGTACTTGTTGAGCAGAACATTATTCCTGGTATTAAAGTTGACAAGGGTTTGGTGCCCCTAGTTGGTTCCAATGATGAGTCATGGTGCCAAGGTCTGGACGGTCTTGCATCTCGCACAGCTGCGTACTACCAGCAAGGTGCCCGCTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTCGCAGTTAAGGAAGCAGCCTGGGGTCTGGCTCGTTATGCTGCAATTTCTCAGGACAACGGGTTGGTTCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAACATAGTATTGAAAGGACTTTCGAAGTCGCCCAAAAGGTCTGGGCTGAAGTTTTCTTCTACCTTGCTGAGAACAATGTCCTGTTTGAGGGTATTCTCCTGAAGCCTAGCATGGTTACTCCGGGAGCTGAATCCAAGGAGAAGGCATCTCCTCAGAAGGTTGCTGAGTACACCCTCAAACTCCTTCACAGGAGAGTTCCCTCTGCTGTCCCTGGAATTATGTTCTTATCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGCCATAAACCAATCCCCTAACCCATGGCACGTGTCATTCTCATACGCCAGAGCCCTCCAGAACACTACATTGAAGACATGGGGAGGCCTCCCTGAGAACGTGAAGGCGGCACAGGATGCACTCCTTTTCCGTGCCAAGTCCAACTCACTGGCTCAGCTTGGAAAGTACACCGGTGAGGGTGAATCTGATGAAGCAAAGAAGGAGTTGTTCGTCAAAGGCTACTCCTACTAA 1200 0.495 MASASATLLKSSLVLEKSEWVKGQNLRQVSAVSVARCNSTNPSTLTIRAGSYADELVKTAKTVASPGRGILAMDESNATAGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTVDGKKIVDVLVEQNIIPGIKVDKGLVPLVGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHSIERTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKEKASPQKVAEYTLKLLHRRVPSAVPGIMFLSGGQSEVEATLNLNAINQSPNPWHVSFSYARALQNTTLKTWGGLPENVKAAQDALLFRAKSNSLAQLGKYTGEGESDEAKKELFVKGYSY* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0199 399 CDD FBP_aldolase_I_a 53 379 - -
Lan13g0199 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 399 IPR000741 GO:0004332|GO:0006096
Lan13g0199 399 SUPERFAMILY Aldolase 45 399 - -
Lan13g0199 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 399 - -
Lan13g0199 399 Pfam Fructose-bisphosphate aldolase class-I 55 399 IPR000741 GO:0004332|GO:0006096
Lan13g0199 399 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 260 270 IPR029768 -
Lan13g0199 399 Gene3D Aldolase class I 6 398 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0199 Lan-Chr13 1249026 1251673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0199 52 399 Miscellaneous Gene Families AT3G52930 56.818 3.79e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0199 K01623 - gmx:100818915 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0199 13 1249026 1251673 Lan13g0199 13 1249026 1251673 ECH
Lan7g0125 7 748857 751386 Lan13g0199 13 1249026 1251673 LSH
Lan8g1814 8 24620937 24623668 Lan13g0199 13 1249026 1251673 LSH