Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0108 ATGAACATGAACGAGGAACCAAACAAACCCAATTCTCTATACGATACTTCTCCATCACACACTCTTCTCGCCAAGCTTCCATACCCAATTGAAGAAACTGCTTCCGATGAACCTGATTCTATACCTTACCTTCAAATCTCTTATAATCATGGTCCTCGCTCCTTCAAAGATCTCACTTTCCTCTTCATCTTTCTCATCTTTCTTCTCTCCACCTTCGCCTTTGGTATCTTCGCCGTCATCCACCGCAACCCCAACTACTCAACTCTCTCTTCCTTCTCCTTCAACCCCAACACCACCTCTTGTGTCAAATCATCCGTTTCTGCATCTTCTTCTTCTTCTTCTTCTTTCAACTCGGTGGTGGTTTCACTCAATTTTTATTCATCTTCTTCTCCTTATGTTGTGAAGGATTTAACATGGACACTTGTTGCTACCTTCATTTTGAGCTTACCCATTTGCTGGCTCCTTCTTCTTTCACTCAAACATTATACCAAACACCTTGTCTACGCTTCCCTCCCATTCTTCATTCTTATCCCTATCTTTCTTAACGTGTATTGGTTTGTTGCCTGCACTGTAAGCTCCACTTGCAGCAACTCCTTCCCTCTGGTCTATAGGATTCTGGTGCTGGTATTCATCTTTTTGTTAATTGGGGTCATCGTGTGGATCTTGGTGGTGAATTGGCATAGGATTGAACTCACTGTGAGCATAATTGGTGTCGCATCCAATGCGCTTTCGTGGAATTTGGGGTTGTTGGGGGTGCTACCTTCTTTGTCAATTGGGCTGTTGGTGTATTATGTGCCAATTGTGTTGTTCATGGTGTTTGCGAGGTTTAACGGGAAGGTTGTGCCGAAGCATTTACATGGTGGTGAATATGGTTGTGTTTGGAAGGAGGATAGTTGGGTGCCTGCTTATTTTACACTGGCGATTCTCACTATGTTGTGGTCTGCAACGGCTATGAAGGAAGCTCAAGTTTATGTTATCAGTGGGACTGTTGCTCATTGGTATTTCTCCAAGGAGGATGAAGCTCAGAGGCGAAGTATTAGAACTTCTTTAAGAAATGCTTTTGGTCCTTCTTCTGGAACAGTATGTTTATCAGGATTGCTTGTCTGTGTTGTTCGACTGGTGCGATCTGCGGTTGATAATGCAAGACAAGACGATGCTACTGGGATAGTGAACCTTGTATTGCAGTGCTGTGTAAATGCCTTACTTACAACATTTGATTTTCTTAATAAGTTTACCATAAACTTTGCTGCAATAACTGGTGAAGCATACTGCTCATCTGCAAGGATGACATATGAGCTTCTAAGGCGTAATCTTCTCTCTGCTGTTTTTGTGGAGACCATCTCATCTCGCCTCTTGGTTGGAATTGTCTTTGTCCTCTCAGCAATATACACAATTGTGGTATGTGCTATATTAAAAGGTGTGACTAATCTTGGGTCTGATTCATATTTCGTGGCTGCATTGGCTTGGGTGGTGCTGATATTAGTGCTGGGTTTCGTCGTGCATGTGCTAGACATTGTAATTGACACAATTTATGTCTGCTACGCAATAGACAGGGACAGAGGAGAGGTTTGTAAACAAGACGTCCATGAGGTTTATGTTCACTTACCCATTAGTAGAAGTCTCAGACAATCTATTACTAGAAGAAGTCTAGGTGTGTAA 1659 0.425 MNMNEEPNKPNSLYDTSPSHTLLAKLPYPIEETASDEPDSIPYLQISYNHGPRSFKDLTFLFIFLIFLLSTFAFGIFAVIHRNPNYSTLSSFSFNPNTTSCVKSSVSASSSSSSSFNSVVVSLNFYSSSSPYVVKDLTWTLVATFILSLPICWLLLLSLKHYTKHLVYASLPFFILIPIFLNVYWFVACTVSSTCSNSFPLVYRILVLVFIFLLIGVIVWILVVNWHRIELTVSIIGVASNALSWNLGLLGVLPSLSIGLLVYYVPIVLFMVFARFNGKVVPKHLHGGEYGCVWKEDSWVPAYFTLAILTMLWSATAMKEAQVYVISGTVAHWYFSKEDEAQRRSIRTSLRNAFGPSSGTVCLSGLLVCVVRLVRSAVDNARQDDATGIVNLVLQCCVNALLTTFDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRLLVGIVFVLSAIYTIVVCAILKGVTNLGSDSYFVAALAWVVLILVLGFVVHVLDIVIDTIYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSITRRSLGV* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0108 552 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 43 533 IPR007603 GO:0022857|GO:0055085
Lan7g0108 552 Pfam Plasma-membrane choline transporter 210 519 IPR007603 GO:0022857|GO:0055085
Lan7g0108 552 PANTHER CTL-LIKE PROTEIN DDB_G0288717 43 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0108 Lan-Chr7 585982 589023 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0108 - - gmx:100801313 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0108 7 585982 589023 Lan13g0175 13 1057579 1061407 LSH