Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0175 ATGAATATAAGCGAGGAACCCAACAAACCCAATTCTCTATACGACACTTCTTCATCACACCCTCTTCTCGCGAATCTCCCATATCCATCATCATCGTTATCTTCACCATTCGATGAAAATGCCTCAGACTATGCCCCTTACCTACACATCTCTTACAATCACGGTCCTCGTTCCTTCAATGACCTTCATTTCCTCTTCCTCTTCCTTCTCTTCATTCTCTCCACCTTTGCCTTTGGTATCTTCGCTGTCTTTCACCACAACCCCAATTACTCCACTCTCTCTTCCTTCTCCTTCGACCCCAACACTTCCTCTTGTGTCAAACCTTCCATTTCTACATCATCTTTCAATTGGGAGGTGCTGGTTTCTCTCGATTTTCATTTTTCTTATTCTCCGAATATTGTGAAGGATTTGACATGGACAGTCGTTGCTACCTTCATTTTCAGCTTACCCATTTGCTGTTTCATTCTTTTTTCACTCAAGCATTATACCAAACACCTTGTCTACGCATCGATCCCATTCTTTATTATCATTCCTATCTTTCTCAACGTGTATTGGTTTGTTGCCTGCACTGTAAGCTCTAATTGCAGCCACGCGTTCCCTCTTGGGTATCGGATTTTGGTGCTGGTGTTCATCTTTTTGATAATTGGGATCATCGTGTGGGTCTTGGTGGTGAATTGGTATCGGATTGAACTCACTGTGAGCATAATTGGGGTGGCTTCCAATGCGCTTTCGAGGAATTTGGGATTGTTGGGGGTGTTACCTTGTTTGACAATTGGGCTGGTTGTGTATTATGTGCCAATTGTGTTGTTCATGGTGTTTGCAAGGTTTAATGGGAAGGTTGTGCCGAAGCATTTACATGGTGATGAATATGATTGCGTTTGGAAGGAGGATAGTTGGGTGCCTGCTTATTTCGCGTTGGCGATTCTCACTATGTTGTGGTCGGCAACGGCTATGAAGGAAGCTCAAGTTTATGTTATCAGTGGGACTGTTGCTCATTGGTATTTCACCAAGGAGGATGAAACTCGTAGGCGGGGTATTATAACTTCTCTAAGAAATGCTTTTGGTCCTTCTTCTGGCACAGTATGTTTATCAGGATTGCTATTGTCTGTTGTTCGAATGGTGCGATCTGCAGTTGATAATGCAAGACGAGAGGATGCTACTGGGATAGTGAACCTTGTATTACAGTGCTGTGTTAATGCCTTACTAGCAGCATTTGATTTTCTTAATAAGTTTACCATAAACTTTGCTGCAATAACTGGCGAAGCTTACTGCTTATCTGCAATGATGACATATGAACTTCTTAGACGTAATCTCCTCTCCGCTGTTTTTGTGGAGACCATCTCATCTCGCCTCTTGGCTGGAATTGTCTTTGTCCTCTCAGCAATATACACAATTGTGGTCTGTGCTATATTAAAAGGTGTGACTAATCTTGGATCTGATTCATATTCTGTGGCTGCATTGGCTTGGGTGCTGCTGATAATAGTGTTGGGGTTCCTTGTGCGTGTGCTAGATATTGTAATCGACACGATTTATGTTTGCTACGCGATAGACAGGGACAGAGGAGAGGTTTGTAAACAAGACGTCCATGAGGTTTATGTTCACTTACCCATTAGTAGAAGTCTAAGACAATCCATTACTAGAAAAACTCTAGGTGTGTAA 1659 0.425 MNISEEPNKPNSLYDTSSSHPLLANLPYPSSSLSSPFDENASDYAPYLHISYNHGPRSFNDLHFLFLFLLFILSTFAFGIFAVFHHNPNYSTLSSFSFDPNTSSCVKPSISTSSFNWEVLVSLDFHFSYSPNIVKDLTWTVVATFIFSLPICCFILFSLKHYTKHLVYASIPFFIIIPIFLNVYWFVACTVSSNCSHAFPLGYRILVLVFIFLIIGIIVWVLVVNWYRIELTVSIIGVASNALSRNLGLLGVLPCLTIGLVVYYVPIVLFMVFARFNGKVVPKHLHGDEYDCVWKEDSWVPAYFALAILTMLWSATAMKEAQVYVISGTVAHWYFTKEDETRRRGIITSLRNAFGPSSGTVCLSGLLLSVVRMVRSAVDNARREDATGIVNLVLQCCVNALLAAFDFLNKFTINFAAITGEAYCLSAMMTYELLRRNLLSAVFVETISSRLLAGIVFVLSAIYTIVVCAILKGVTNLGSDSYSVAALAWVLLIIVLGFLVRVLDIVIDTIYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSITRKTLGV* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0175 552 PANTHER CTL-LIKE PROTEIN DDB_G0288717 47 533 - -
Lan13g0175 552 Pfam Plasma-membrane choline transporter 210 519 IPR007603 GO:0022857|GO:0055085
Lan13g0175 552 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 47 533 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0175 Lan-Chr13 1057579 1061407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0175 - - gmx:100810591 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0175 13 1057579 1061407 Lan13g0175 13 1057579 1061407 ECH
Lan7g0108 7 585982 589023 Lan13g0175 13 1057579 1061407 LSH