Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0094 ATGCCGAAGCTTTGTAACTTGCAAATCAACATGAATGGTCAGCATATATTCCTTGTGAACGAGAAGATTATATCAAGATACTGTGGAAGGGTGAAGAAAATATTGAATCATGAAGAGAGAAGAAAGAAGTTTGAGATTAGAATCAATGATTTCCCTGGAGGCCCTAGAGGGTTTGAGCTAGTTTCAAGGTTCTGTTACAACAAAGGCAAAATCACAATCACTGTTGCTAATGTGCCTCTACTTCATTGTTGTGCTATTTATCTTGGAATGAATGAGGATCTTTTCACCAACAATCTCTTGCAACAAACAGAAACTTTTCTTAAGGATATCTATTATTGGAAATGGAATGACATACTTGTAAGTCTTATGAGTTGTGAGCTACTTTATACATATGCAGATTGTTATGGTCTCTTAGATAAGATCATTTGTGCACTCTTAGCAAAGATTGCTCAAAATTCAGATGCAAACCTCTTCACTTCCTCACCCTCATCGTCGTCGTCGTATTCTTCACCAGATAGCAATTCTATTAAGAGATTCTCTTCATCAACCAAAACCACACCAGAAAAAGTAAACTCAACTTTGCAAAGCAAAGCATGGTGGTTTGATGATTTAACCAGTTTATACCCAAAGATCATTGAGAAACTTTTTCAGTGTGCAGGAGCATATAAAACTGATAACAACAACTTAGTCCTTACAAGATTTCTGTTGCATTATCTGAAAACAGCTTCTCAAACTAGAGCTGTTAATTGTAGAAATAGCAATGAGTATGCTGCACTGGCAGAAACAGCTGTTTATGGTGTCATATTGGTAGGTAAGAAGATTTTTTCTTGTAGAGGCCTTTTTTGGGTTCTAAGGATTGTTTCCGGATTCGGGTTAAGCAGAGATTGCAGAACTGAGCTAGAAAAAATGATTGGTGGGATGCTTGAGCAAGCTACATTGGATGATCTTCTTGTACCAGGGCATGATATGGGAGTTTATTATGATGTTGATCTTGTAATAAGATTGGTTAGACTATTTGTTGATATCAATGGCTTTGATGGAGTGTCTTTGCAGAAAATGAAAAGGGTTGGAAGATTAGTTGATAAGTATTTGAGGGAGATATCCCCTGACCATAACCTCAAGATCTCTAAATTTCTTAGAGTTGCAGAATGTTTGCCAGACTCTGCTAGGGACTGCTTTGATGGTGTCTATAGAGCCATTGATATCTACCTTGAGTCTCATCCAAAAATCACATTTGAAGAAAGATCAAGATTGTGTAGATGTCTCAATTATAGTAAACTCAGCTTTGAAGCTAGTAAAGATATAGCCAAGAGTCCTAGAATACCACCAAGGATTGCAATGCAAGCTCTTATTTCTCAACAAACAAAAATTCCAACAAGTGACTTCGGAACCAAGAGTCCAAGAATGAATCATTCCCAAGTAGTTTTATACAATGAAGCCAATGCAAGAAGCTTAAAAGACAAGATTGAAAACCAAGAGAGAATGCAAATGAATGGTCAAGTGTCAAAGTTTGTAAGGCATAAAATGTTGTTGAATCTTACTCATTCTAGAGCCTTAGTCAGATTTTGTTGA 1572 0.3664 MPKLCNLQINMNGQHIFLVNEKIISRYCGRVKKILNHEERRKKFEIRINDFPGGPRGFELVSRFCYNKGKITITVANVPLLHCCAIYLGMNEDLFTNNLLQQTETFLKDIYYWKWNDILVSLMSCELLYTYADCYGLLDKIICALLAKIAQNSDANLFTSSPSSSSSYSSPDSNSIKRFSSSTKTTPEKVNSTLQSKAWWFDDLTSLYPKIIEKLFQCAGAYKTDNNNLVLTRFLLHYLKTASQTRAVNCRNSNEYAALAETAVYGVILVGKKIFSCRGLFWVLRIVSGFGLSRDCRTELEKMIGGMLEQATLDDLLVPGHDMGVYYDVDLVIRLVRLFVDINGFDGVSLQKMKRVGRLVDKYLREISPDHNLKISKFLRVAECLPDSARDCFDGVYRAIDIYLESHPKITFEERSRLCRCLNYSKLSFEASKDIAKSPRIPPRIAMQALISQQTKIPTSDFGTKSPRMNHSQVVLYNEANARSLKDKIENQERMQMNGQVSKFVRHKMLLNLTHSRALVRFC* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0094 523 ProSiteProfiles NPH3 domain profile. 198 456 IPR027356 -
Lan7g0094 523 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 498 - -
Lan7g0094 523 PANTHER OS12G0117600 PROTEIN 2 498 IPR043454 -
Lan7g0094 523 Pfam NPH3 family 199 432 IPR027356 -
Lan7g0094 523 SUPERFAMILY POZ domain 3 92 IPR011333 -
Lan7g0094 523 MobiDBLite consensus disorder prediction 158 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0094 Lan-Chr7 504004 506294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0094 28 513 EF-hand Containing Proteins AT3G44820 26.766 1.82e-49 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0094 - - gmx:100808259 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0094 7 504004 506294 Lan13g0157 13 949653 952482 LSH