Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0157 ATGCAGAAATCTTGTGACTTGAAAATCAACATTAATGATCACCAGTTATTCCTTGTGAATCAGATTATATCAAAGTACTGTGGAAGGGTGAAGAAAATATTGAAACATGAAAAGAGAAGAAAGAACTTAGAGATTAGAATCAATGATTTCCCAGGAGGCCCTGATGGGTTTGAAATGGTTTCAAGGTTCTGTTACAACAAAGGAAAATTTCCAATTACTGTAGCTAATGTTCCTCTCCTTCATTGTTGTGCCATTTATCTTGGAATGAGTGAAGAGTTCTTCACCAACAATCTCTTGCAACAAACAGAAACTTTTCTTAAGGGAATCTACTATTGGAAATGGAATGACATAGTTGTAAGTCTCATAAATTGTGAGCTACTTTATACATATGCAGATTGCTATGGTCTCTTAGATAAGATCATTGGTGCACTCTTAACAAAGATTGCTCAAAATTCAGATGCAAACCTCTTCACTTCCTCATCTTCATCATCATTGTCATATTCTTCACCAGATAGCAATTCCATTAAGAGATCCTTTTCTTCAACCAAAACCACCCCAGAAAAAATAAACTCAACTTTACCAAGCAAAGCATGGTGGTTTGATGATTTGACCACTTTACCTCCAAGTATCATTTGTAAGCTTTTTCAGTGTGTTGGAGCATACAAAACTGGAAACAACAACTTAGTCCTTACAAGATTTTTGTTGCATTATCTAAAAACAGCTACTCAAACTAGAGGTGTGAATGATAGAAACAACACTGAGTATGCTGCACTTGCAGATACAGCTGTTTATGGAGTCATATTGGTTGGTAAGAAGAGTTTTTCATGTAGAGGTCTTTTTTGGGTGCTAAGGATTGTATCTGGCTTTGGTTTGAGTATAGAATGCAGAAGTGAACTAGAGAAAATGATTGGAGGGATGCTTGAACAAGCTACATTGGATGATCTTCTAGTATCAGGGCATGATATGGGAGTATATTATGATGTTAATCTGGTTATAAGATTGGTTAGATTATTTGTTGATATAAGTGGTTTTGATGGAGTTTCTTTGCAGAAAGTGAAAAGGGTTGGAAGATTAGTTGACAAATATTTGAGGGAGATTTCTCCTGACCATAACCTTAAGATCTCTAAATTTCTTGGAGTTGCAGAATGCTTGCCAGATTCTGCTAGGGACTGTTTTGATGGGGTCTATAGAGCCATTGACATATATCTTGAGTCTCATCCAAGGAGCACTTTTGAGGAAAGATCAAGATTGTGTAGATGTCTCAATTACAATAAACTCAGTTTTGAAGCTAGTAAAGATATGGCTAAGAGTCCTAGAATACCTCCAAGGATTTCAATGCAAGCTCTTATTTCTCAAAAAACTAAGATACCAACAACTGAGTTTGTACCTGAGAGTTCAAAAATGAACCCTTCTCAGATAGTTTTGTATAATGAAACCAACAACACAGAGAGTTTCACACAAGAGAAAAAAGACATGACAGTAATAAACCTAGAGAAAATGCAAAGAAGAGTTGTGGAATTGGAAAAATTATGCAAAGAAATGGATGGTCATTTATCAAAGTTGGTAAGCCATAGAGTGTTGTTTAATCCTACTCGTTCTAGAGCCTTACTAAGATTTTGTTGA 1623 0.3561 MQKSCDLKININDHQLFLVNQIISKYCGRVKKILKHEKRRKNLEIRINDFPGGPDGFEMVSRFCYNKGKFPITVANVPLLHCCAIYLGMSEEFFTNNLLQQTETFLKGIYYWKWNDIVVSLINCELLYTYADCYGLLDKIIGALLTKIAQNSDANLFTSSSSSSLSYSSPDSNSIKRSFSSTKTTPEKINSTLPSKAWWFDDLTTLPPSIICKLFQCVGAYKTGNNNLVLTRFLLHYLKTATQTRGVNDRNNTEYAALADTAVYGVILVGKKSFSCRGLFWVLRIVSGFGLSIECRSELEKMIGGMLEQATLDDLLVSGHDMGVYYDVNLVIRLVRLFVDISGFDGVSLQKVKRVGRLVDKYLREISPDHNLKISKFLGVAECLPDSARDCFDGVYRAIDIYLESHPRSTFEERSRLCRCLNYNKLSFEASKDMAKSPRIPPRISMQALISQKTKIPTTEFVPESSKMNPSQIVLYNETNNTESFTQEKKDMTVINLEKMQRRVVELEKLCKEMDGHLSKLVSHRVLFNPTRSRALLRFC* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0157 540 MobiDBLite consensus disorder prediction 159 179 - -
Lan13g0157 540 SUPERFAMILY POZ domain 4 91 IPR011333 -
Lan13g0157 540 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 514 - -
Lan13g0157 540 Pfam NPH3 family 198 431 IPR027356 -
Lan13g0157 540 PANTHER OS12G0117600 PROTEIN 2 514 IPR043454 -
Lan13g0157 540 ProSiteProfiles NPH3 domain profile. 197 455 IPR027356 -
Lan13g0157 540 Coils Coil 497 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0157 Lan-Chr13 949653 952482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0157 4 522 EF-hand Containing Proteins AT3G44820 25.654 2.33e-50 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0157 - - gmx:100808259 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0094 7 504004 506294 Lan13g0157 13 949653 952482 LSH