Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0090 ATGGGTTCGAAAACCCTAATGGATTTTTGGAAACCACCTTCGAAGCGATTGAAGCAAACCCTCACTCCATCACTCTCCAAATCCGATGATCCCACCACCACCACCACCACTTCACTCTCCGTTCACCAGAAATCACGCATCCAACACAACAAGCTTCTCGCCAAGTCCAAGCGTAATCTCAATATCTGTCTCCAAAAGATTTCCGATTCTAAATCCAAAGGTGGTTTTGTAACACTAGAGGAGTTAATGGTGGAAGAGACGTGGTTGGAAGCTCTTAACGGTGAACTTGAAAAACCCTATGCTATTACTCTTTCTAAATTTGTGGAAACTGAGATTAGTAGCGGCAATTATGTGTATCCTCCTTCTCATTTGATCTTCAATGCTCTTAATTCTACTCCTTTTGATACTGTTAAAGCTGTCATCCTTGGACAGGACCCTTATCATGGACCTGGTCAAGCGATGGGCCTCTCATTCTCAGTGCCTGAGGGTGTCAAAGTTCCTTCCAGTTTAGTAAATATATTTAAGGAACTTAAGGAAGACCTTGGCTGCTCGATTCCTCCCCATGGAAACCTACAGAAATGGGCTGCGCAGGGAGTTCTCTTGCTCAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAACTCTCATGCAAAAAAGGGCTGGGAACAATTTACTGATTTTGTTATAAAGACAATCTCACAGAAGAAGGAAGGGATTGTGTTTCTGTTGTGGGGAAACTCTGCTCGGGAGAAATCGAGGTTAATTGATGCAACAAAGCATCACATTCTTGAAGCTGCACATCCTTCTGGTTTATCTGCACATAGAGGCTTCTTTGGCTGCAGGCACTTTTCTCGCACTAACCAACTTCTGGAGCAAAACGGGATCGGTCCCATTGATTGGCAACTATAA 909 0.4389 MGSKTLMDFWKPPSKRLKQTLTPSLSKSDDPTTTTTTSLSVHQKSRIQHNKLLAKSKRNLNICLQKISDSKSKGGFVTLEELMVEETWLEALNGELEKPYAITLSKFVETEISSGNYVYPPSHLIFNALNSTPFDTVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELKEDLGCSIPPHGNLQKWAAQGVLLLNAVLTVRKHQANSHAKKGWEQFTDFVIKTISQKKEGIVFLLWGNSAREKSRLIDATKHHILEAAHPSGLSAHRGFFGCRHFSRTNQLLEQNGIGPIDWQL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0090 302 ProSitePatterns Uracil-DNA glycosylase signature. 138 147 IPR018085 GO:0006281|GO:0016799
Lan7g0090 302 Gene3D - 78 302 IPR036895 -
Lan7g0090 302 PANTHER URACIL-DNA GLYCOSYLASE 2 302 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lan7g0090 302 Hamap Uracil-DNA glycosylase [ung]. 85 301 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lan7g0090 302 TIGRFAM ung: uracil-DNA glycosylase 86 293 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lan7g0090 302 SMART UDG_2 130 290 IPR005122 -
Lan7g0090 302 SMART UDG_2_a 130 290 - -
Lan7g0090 302 CDD UDG-F1-like 100 300 IPR002043 GO:0004844|GO:0006281|GO:0006284
Lan7g0090 302 SUPERFAMILY Uracil-DNA glycosylase-like 82 302 IPR036895 -
Lan7g0090 302 MobiDBLite consensus disorder prediction 19 41 - -
Lan7g0090 302 Pfam Uracil DNA glycosylase superfamily 135 289 IPR005122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0090 Lan-Chr7 487122 490934 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0090 K03648 - gmx:100818241 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0090 7 487122 490934 Lan13g0153 13 931413 934204 LSH