LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan13g0153	ATGCATAGTTTCCCGCCAGAAATGGATTTGAAAACCCTAATGGATTCTTCTCAACAAACTCTCTCTCCCTCAACCTCCAATTCCGACGCACTAGAGGATTTGATGGTGGAAGAGACGTGGTTGGAAGCTCTAAATGGAGAATTTCAAAAACCCTATGCCCTTGCTCTTTCCAAATTTGTCCAAACCGAGATTTGTAGCAGCAGCGATGTGTATCCTCCTACTCATTTGATTTTCAATGCTCTTAATTCTACTCCCTTTAGTACAGTTAAAGTTGTTATCCTTGGCCAGGACCCTTATCATGGACCTGGTCAAGCAATGGGCCTCTCATTCTCAGTGCCTGAGGGAGTCAAAGTTCCTTCCAGTTTGGCAAATATATTTAAGGAATTTCAGAAAGACATTGGCTGTTCAATTCCCTCCCATGGAAATCTAGACAAATGGGCTGTGCAGGGAGTTCTCTTGCTCAACGCTGTTCTCACAGTCAGGAAGCATCAAGCGAATTCTCATGCAAAAAAGGGCTGGGAACAATTTACTGATACTGTTATCAAGACAATCTCACAGAAGAAGGAAGGAGTTGTGTTTCTGCTGTGGGGAAACTCTGCCCGGGAGAAATCGAGGTTAGTCGATGCAACAAAGCATCACATTCTTCAAGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGCTTCTTTGGTTGCAGGTAA	702	0.4387	MHSFPPEMDLKTLMDSSQQTLSPSTSNSDALEDLMVEETWLEALNGEFQKPYALALSKFVQTEICSSSDVYPPTHLIFNALNSTPFSTVKVVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLANIFKEFQKDIGCSIPSHGNLDKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDTVIKTISQKKEGVVFLLWGNSAREKSRLVDATKHHILQAAHPSGLSANRGFFGCR*	234

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan13g0153	233	CDD	UDG-F1-like	52	233	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Lan13g0153	233	SUPERFAMILY	Uracil-DNA glycosylase-like	35	233	IPR036895	-
	Lan13g0153	233	SMART	UDG_2_a	82	230	-	-
	Lan13g0153	233	SMART	UDG_2	82	230	IPR005122	-
	Lan13g0153	233	Hamap	Uracil-DNA glycosylase [ung].	37	233	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Lan13g0153	233	TIGRFAM	ung: uracil-DNA glycosylase	38	233	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Lan13g0153	233	Gene3D	-	15	233	IPR036895	-
	Lan13g0153	233	PANTHER	URACIL-DNA GLYCOSYLASE	23	233	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Lan13g0153	233	Pfam	Uracil DNA glycosylase superfamily	87	229	IPR005122	-
	Lan13g0153	233	ProSitePatterns	Uracil-DNA glycosylase signature.	90	99	IPR018085	GO:0006281\|GO:0016799

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan13g0153	Lan-Chr13	931413	934204	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan13g0153	K03648		-	gmx:100818241	361.688

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan7g0090	7	487122	490934	Lan13g0153	13	931413	934204	LSH