Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0083 ATGTCTGGTTCTAATCAGTGGACGGCTAAGCGCGTGAGAGAAACATTCATCAGATTCTTCAAATTAAAGGAACATACTTTTTACAATTCTAGTCCTGTTGTTCCTTATAATGACCCAACCCTTCTCTTCGCTAACGCTGGCATGAACCAATTCAAGCCAATCTTTTTGGGAACTGCGGATCCTAATACTGAATTGAGCAAACTCACTCGCGCTTGCAATACCCAAAAGTGCATTCGAGCAGGTGGTAAGCACAATGATCTTGATGACGTTGGAAAAGATACATACCACCACACCTTCTTTGAGATGCTGGGAAATTGGTCATTTGGGGATTACTTCAAAAAAGAAGCCATTAGCTGGGCATGGGAACTTCTAACCAGGATTTATAAATTACCATCAGACCGCATTTATGCAACATATTTTGGCGGTGATGAAAGTTCTGGTCTTGCCCCTGATACCGAGGCTAGAGATATTTGGCTTGCCTTTTTACCTCCTGAACGTGTGCTTCCTTTTGGCTGTAAGGACAATTTTTGGGAGATGGGTGATACTGGTCCTTGTGGTCCTTGCACTGAAATACATTTTGACAGAATAGGTAACCGTGACGCAGCATCTTTGGTTAATAATGACGACCCTACTTGCATTGAGATATGGAACCTTGTCTTTATTCAGTTCAATAGGGAAGCCGATGGCTCTCTTAAACCTCTACCTGCTAAGCATGTTGATACTGGGATGGGTTTTGAAAGATTGACCTCTATACTTCAGAACAAAATGAGCAATTATGACACCGATGTCTTCTTGCCTATCTTTGATGCTATTCAGCTGGCAACTGGTGCTAGGCCTTATTCTGGGAAAGTTGGACAAGAGGATGAAGATAAAGTTGACATGGCATACAGGGTCATTGCCGATCACATCAGAACCCTGTCATTTGCTATTGCTGATGGGTCTCGTCCTGGTAATGAGGGCCGTGAGTATGTTCTGAGGCGCATACTGCGTCGAGCTGTTCGTTATGGACGCGAAGTGTTAAAAGCTAAGGAGGGCTTTTTCAATGGGCTTGTAAGTGTTGTGGTGCGTGTCATGTGTGATGTTTTCCCTGAGCTAAAAGATCGAGAAGAACACATTGTGGAAGTGATTGCAGAGGAGGAAGAAAGTTTCGGGATAACCTTACTTAAGGGGATTGATAAATTTAAGAAATTTAAGACAGCTGCTGAAGATGCTAAGAGAAAGACACTGAGCGGAGAGGAAGCATTTCTCTTGTGGGATACATATGGGTTCCCATTAGATCTTACCCAGCTGATGGCAGAAGAAGCGCAGTTGATTGTTGACGTTGAAGGTTTTAATAGTGCCATGGAAGATGCAAGGGAGAGATCGAGAAATGCTCAAACAAAGCAAGCTGGTGGTCTCATTGTTATGGATGCTGATGCCACTGCAGCATTAAACAGAAGGGATGTTGCTCCGACGGATGATAGCTTCAAATATGTTTGGGAGGACCATGAAAGCGTGGTAAAAGCAATATATACTGGTTCTGAGTTTGTTGATTCTGTTAATACTAATGGGGACATTGGTATAGTTCTGGAGTCTTCAAGCTTCTATGCTGAACAAGGTGGTCAGATTTTTGATACTGGATCACTTAAGGGTCCTTATGCTTTGTTTGAAGTCCATAATGTGCAAGTTTATGGGGGTTACGTTCTACACATTGGTTCTAATGGAACTGGCATCTCTGTTGGCGACAAAGTTGTATGTCAGGTTGATTACGAAAGGCGCAAACTTATAGCCCCTAACCATACCTGCACACATATATTAAACTTTGCTCTTAGGAAAGAACTTGGCGATCATATTGACCAAAAAGGATCTATTGTTCTTCCTGAAAAATTGAGATTTGATTTTTCTCACGGCAAGCCTGTTGATGCTAAAACTTTGGAGAAAATTGAGGATATTGTTAATGAGCAAATCAATGCTAAATTGGATGTAAGTGCAAAGGAGGCATCTCTCGCTGAAGCTAAGCGTGTCAATGGTTTACGAGCTGTTTTTGGAGAAGTCTATCCTGATCCAGTTAGAATTGTGTCAATCGGACAAAAAGTTGAGGATCTTATTGCCGATCCTGGTAATGAAAAATGGCTATCTATTTCAGCAGAATTATGTGGTGGTACCCATATTGTAAACACAGGAGAAGCTAAAGCTTTTGCACTTTTATCTGAAGAGGGAATTGCAAAAGGAATCCGTAGAATAACAGCTGTCACAGCTGATCGTGCTTATGATGCAAAGAAAGCGGCAGATGTGTTTGAGAAGCAAGTGGATGATGCAGATAAGTTAGAAGGAAGTTTGCTGGAAGAGAAAGTTTCATATCTGAACCGCACCGTGGAAACACTGTCAATTTCTGCAGCCAAGAAAACTGGCATCAAGGATAAGATTGCCAAACTTCAGGCTAAAGTGAGAATAGCACAAAAACAGCTAGCTGAAGCGAACAAACGTGAAGCTGTAAGGATCGCGGTTGAGAAGGCTGAACTTGCAGCTTCAGAGGGGTTAACCTTTTGTATATGTCATGTGGATGTTGGTCTTGATGTAGCCGCAGTTCGTGAAGCTGTTACAAAAGTCATGCAGCAACAGGGGTTATCTGTAATGGTTTTTAGTACTGATGAATCTACAAACAAGGCTGTAGTTTGTGCTGGGGTGCCCGAGAAAGGAGATGGCGAGAAGCTTGACGTGTCAGAGTGGCTAAGTAATGCTTTGGGGCCTCTCAAAGGGAAATGTGGCAAAGGAAAAGGTGGTCTTGCAACTGGACAGGGTACAGAAGCATCACATGTGAATGAGGCTATGGAGCTTGCAGCATCATTTGCATCAATGAAATTGAGTTAA 2850 0.4253 MSGSNQWTAKRVRETFIRFFKLKEHTFYNSSPVVPYNDPTLLFANAGMNQFKPIFLGTADPNTELSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAISWAWELLTRIYKLPSDRIYATYFGGDESSGLAPDTEARDIWLAFLPPERVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKPLPAKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKVGQEDEDKVDMAYRVIADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAKEGFFNGLVSVVVRVMCDVFPELKDREEHIVEVIAEEEESFGITLLKGIDKFKKFKTAAEDAKRKTLSGEEAFLLWDTYGFPLDLTQLMAEEAQLIVDVEGFNSAMEDARERSRNAQTKQAGGLIVMDADATAALNRRDVAPTDDSFKYVWEDHESVVKAIYTGSEFVDSVNTNGDIGIVLESSSFYAEQGGQIFDTGSLKGPYALFEVHNVQVYGGYVLHIGSNGTGISVGDKVVCQVDYERRKLIAPNHTCTHILNFALRKELGDHIDQKGSIVLPEKLRFDFSHGKPVDAKTLEKIEDIVNEQINAKLDVSAKEASLAEAKRVNGLRAVFGEVYPDPVRIVSIGQKVEDLIADPGNEKWLSISAELCGGTHIVNTGEAKAFALLSEEGIAKGIRRITAVTADRAYDAKKAADVFEKQVDDADKLEGSLLEEKVSYLNRTVETLSISAAKKTGIKDKIAKLQAKVRIAQKQLAEANKREAVRIAVEKAELAASEGLTFCICHVDVGLDVAAVREAVTKVMQQQGLSVMVFSTDESTNKAVVCAGVPEKGDGEKLDVSEWLSNALGPLKGKCGKGKGGLATGQGTEASHVNEAMELAASFASMKLS* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0083 949 Pfam DHHA1 domain 803 942 IPR003156 GO:0003676
Lan7g0083 949 Gene3D - 837 944 - -
Lan7g0083 949 PRINTS Alanyl-tRNA synthetase signature 85 96 IPR002318 GO:0000166|GO:0005737
Lan7g0083 949 PRINTS Alanyl-tRNA synthetase signature 213 224 IPR002318 GO:0000166|GO:0005737
Lan7g0083 949 PRINTS Alanyl-tRNA synthetase signature 240 253 IPR002318 GO:0000166|GO:0005737
Lan7g0083 949 PRINTS Alanyl-tRNA synthetase signature 297 313 IPR002318 GO:0000166|GO:0005737
Lan7g0083 949 PRINTS Alanyl-tRNA synthetase signature 321 334 IPR002318 GO:0000166|GO:0005737
Lan7g0083 949 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 683 741 IPR012947 GO:0004812|GO:0005524|GO:0043039
Lan7g0083 949 CDD AlaRS_core 9 255 - -
Lan7g0083 949 Hamap Alanine--tRNA ligase [alaS]. 1 948 IPR023033 GO:0004813
Lan7g0083 949 PANTHER BNACNNG61840D PROTEIN 4 948 - -
Lan7g0083 949 Gene3D Bira Bifunctional Protein; Domain 2 7 256 IPR045864 -
Lan7g0083 949 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 7 755 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Lan7g0083 949 Coils Coil 795 822 - -
Lan7g0083 949 Gene3D - 582 757 - -
Lan7g0083 949 SMART tRNA_SAD_4 683 742 IPR012947 GO:0004812|GO:0005524|GO:0043039
Lan7g0083 949 Coils Coil 441 461 - -
Lan7g0083 949 SUPERFAMILY Translation proteins 508 581 IPR009000 -
Lan7g0083 949 Gene3D - 508 581 - -
Lan7g0083 949 SUPERFAMILY Class II aaRS and biotin synthetases 7 259 IPR045864 -
Lan7g0083 949 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 260 462 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Lan7g0083 949 TIGRFAM alaS: alanine--tRNA ligase 12 926 IPR002318 GO:0000166|GO:0005737
Lan7g0083 949 SUPERFAMILY ThrRS/AlaRS common domain 581 757 IPR018163 GO:0000166
Lan7g0083 949 PANTHER ALANYL-TRNA SYNTHETASE 4 948 - -
Lan7g0083 949 Pfam tRNA synthetases class II (A) 12 585 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0083 Lan-Chr7 439695 455057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0083 K01872 - gmx:100788271 1546.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0083 7 439695 455057 Lan13g0148 13 867167 878493 LSH