Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0057 ATGTTTTTGGTTAAACCCATTTTCCGAAAACACCAAAGACCCTCTTCTACCCTCTGGCTACTTCACCACACGTTTAGTTCCTCAGCAGCCGCAGTTCAAGCTGAAAAGGCCATCAAAGACGGTCCCAGAAACGATTGGACCAGAGATGAAATCAAATCCGTTTACGATTCTCCCATTCTCGATCTTCTCTTTCATGGGGCTCAAGTTCACAGACATGCTCATAACTTCAGGGAAGTGCAGCAGTGTACTTTGATGTCAATTAAAACAGGTGGGTGTAGTGAAGATTGTTCCTACTGTCCTCAATCCTCTAGGTATGATACTGGTCTTAAATCCCAACGACTTACCAACAAGGACGCTGTTCTCCAAGCTGCAAAAAAGGCAAAAGAGGCTGGGAGCACTCGCTTTTGTATGGGTGCTGCATGGAGGGAGACAGTAGGAAGAAAGACAAACTTCAACCAGATCCTTGATTATGTAAAAGACATAAGGGAAATGGGAATGGAGGTGTGTTGCACCCTTGGCATGCTGGAGAAACAGCAGGCTGTTGAACTCAAGAAGGCAGGTCTGACAGCTTATAATCACAATCTTGACACTTCAAGGGAATACTATCCAAAAATCATTACAACGAGGACTTACGATGAGCGTCTAAAAACCCTTGAGTTTGTTCGTGATGCAGGGATCAATGTTTGTTCTGGAGGAATTATCGGGCTTGGAGAAGCAGAGGATGACCGAGTAGGTTTGTTACACACATTGTCAACCCTACCCACTCATCCAGAGAGTGTTCCTATTAATGCACTTATTGCTGTAAAGGGAACCCCTCTAGAGGATCAGAAGCCTGTCGAAATATGGGAGATGATTCGCATGATAGCCACGGCGCGTATCATAATGCCAAAAGCGATGGTGAGGTTATCAGCAGGCAGAGTTAGATTCTCCATGCCTGAGCAGGCATTGTGCTTTCTGGCTGGTGCAAATTCTATCTTCACTGGTGAAAAGCTACTCACAACTGCTAACAATGATTTTGATGCTGATCAACTCATGTTTAAAGTTCTTGGTCTGATCCCAAAAGCTCCAAGCTTTAATGAAGACCAAAATAGCGAGGCAGAGGATTTAAAGGAAGCTGCTTCTTCTAGTTGA 1131 0.4447 MFLVKPIFRKHQRPSSTLWLLHHTFSSSAAAVQAEKAIKDGPRNDWTRDEIKSVYDSPILDLLFHGAQVHRHAHNFREVQQCTLMSIKTGGCSEDCSYCPQSSRYDTGLKSQRLTNKDAVLQAAKKAKEAGSTRFCMGAAWRETVGRKTNFNQILDYVKDIREMGMEVCCTLGMLEKQQAVELKKAGLTAYNHNLDTSREYYPKIITTRTYDERLKTLEFVRDAGINVCSGGIIGLGEAEDDRVGLLHTLSTLPTHPESVPINALIAVKGTPLEDQKPVEIWEMIRMIATARIIMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTANNDFDADQLMFKVLGLIPKAPSFNEDQNSEAEDLKEAASSS* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0057 376 TIGRFAM bioB: biotin synthase 54 351 IPR002684 GO:0004076|GO:0009102
Lan7g0057 376 ProSiteProfiles Radical SAM core domain profile. 77 306 IPR007197 GO:0003824|GO:0051536
Lan7g0057 376 SFLD BATS domain containing 40 359 - -
Lan7g0057 376 SFLD biotin synthase 40 359 IPR024177 -
Lan7g0057 376 CDD Radical_SAM 89 289 - -
Lan7g0057 376 Pfam Biotin and Thiamin Synthesis associated domain 261 351 IPR010722 -
Lan7g0057 376 SMART MiaB 82 290 IPR006638 GO:0003824|GO:0051536
Lan7g0057 376 SMART BATS_2 261 353 IPR010722 -
Lan7g0057 376 PIRSF Biotin_synth 27 360 IPR024177 -
Lan7g0057 376 PANTHER BIOTIN SYNTHASE 27 369 IPR002684 GO:0004076|GO:0009102
Lan7g0057 376 Gene3D Aldolase class I 43 355 IPR013785 -
Lan7g0057 376 SUPERFAMILY Radical SAM enzymes 44 354 - -
Lan7g0057 376 Hamap Biotin synthase [bioB]. 44 354 IPR002684 GO:0004076|GO:0009102
Lan7g0057 376 Pfam Radical SAM superfamily 89 247 IPR007197 GO:0003824|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0057 Lan-Chr7 284680 288141 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0057 K01012 - gmx:100808225 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0057 7 284680 288141 Lan13g0108 13 632736 637000 LSH