Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0108 ATGTTTTTGGCTAAACCCATTTTCCGAAAACACCTAATACCCTCTTCCACCCTTTCAATATTCCACCATACATTTAGTTTTTCTTCTTCTGCAGCTGCAATTCAAGCTCAGAAAACTATCAATGAAGGACCCAGAAATGATTGGACTCAAAACGAAATCAAATCCATTTACGATTCTCCCATTCTCGATCTTCTCTTTCATGGGGCTGAAGTTCATAGACATGCTCATAACTTCAGAGAAGTGCAACAGTGTACTTTGATGTCAATTAAAACTGGAGGGTGCAGTGAAGATTGTTCATATTGTCCTCAATCTTCTAGGTATGATACTGGTCTCAAAGCTCAACGACTTACCAACAAGGACGCTGTTCTTCAAGCTGCAACAAAGGCAAAAGAGGCTGGGAGCACTCGCTTTTGTATGGGTGCTGCATGGAGGGACACGGTAGGAAGAAAGACCAACTTCAACCAGATCCTTGAATATGTAAAAGAAATAAGGGGTATGGGGATGGAGGTGTGTTGCACCCTTGGCATGCTGGAGAAACAGCAGGCTGTTGACCTAAAGAATGCAGGTCTCACGGCCTACAATCACAATCTTGACACTTCAAGGGAATATTATCCAAACATCATCACGACGAGGACTTATGATGAGCGCCTACAAACCCTTGAGTTCGTTCGTGATGCAGGGATTAATGTTTGTTCTGGAGGAATTATAGGGCTCGGAGAAGCAGAGGATGACCGAGTAGGTTTGTTACACACGTTGTCAACCCTCCCCACGCATCCAGAGAGTGTTCCTATTAATGCACTTATCGCTGTAAAGGGAACCCCTCTAGAGGATCAAAAGCCTGTAGAAATATGGGAGATGATTCGCATGATAGCCACAGCGCGTATCGTAATGCCAAAAGCAATGGTGAGGTTATCAGCAGGTAGAGTTCGTTTCTCAATGCCCGAGCAGGCATTGTGCTTTCTTGCAGGCGCAAATTCTATCTTCACTGGTGAAAAGCTTCTCACTACTGCTAACAATGATTTCGATGCTGATCAACTCATGTTTAAAGTTCTCGGTCTGCTCCCGAAAGCTCCAAGCTTTAATGAAGATCAAACTAGTGAGGCAGAGGATTTTAAGGAAGCAGCTTCTTCTAGTTGA 1137 0.4389 MFLAKPIFRKHLIPSSTLSIFHHTFSFSSSAAAIQAQKTINEGPRNDWTQNEIKSIYDSPILDLLFHGAEVHRHAHNFREVQQCTLMSIKTGGCSEDCSYCPQSSRYDTGLKAQRLTNKDAVLQAATKAKEAGSTRFCMGAAWRDTVGRKTNFNQILEYVKEIRGMGMEVCCTLGMLEKQQAVDLKNAGLTAYNHNLDTSREYYPNIITTRTYDERLQTLEFVRDAGINVCSGGIIGLGEAEDDRVGLLHTLSTLPTHPESVPINALIAVKGTPLEDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTANNDFDADQLMFKVLGLLPKAPSFNEDQTSEAEDFKEAASSS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0108 378 SFLD biotin synthase 41 361 IPR024177 -
Lan13g0108 378 ProSiteProfiles Radical SAM core domain profile. 79 308 IPR007197 GO:0003824|GO:0051536
Lan13g0108 378 PIRSF Biotin_synth 28 362 IPR024177 -
Lan13g0108 378 Gene3D Aldolase class I 45 357 IPR013785 -
Lan13g0108 378 TIGRFAM bioB: biotin synthase 55 353 IPR002684 GO:0004076|GO:0009102
Lan13g0108 378 Pfam Biotin and Thiamin Synthesis associated domain 263 353 IPR010722 -
Lan13g0108 378 SMART MiaB 84 292 IPR006638 GO:0003824|GO:0051536
Lan13g0108 378 Hamap Biotin synthase [bioB]. 46 356 IPR002684 GO:0004076|GO:0009102
Lan13g0108 378 SMART BATS_2 263 355 IPR010722 -
Lan13g0108 378 SFLD biotin synthase like 41 361 - -
Lan13g0108 378 SUPERFAMILY Radical SAM enzymes 46 355 - -
Lan13g0108 378 CDD Radical_SAM 91 291 - -
Lan13g0108 378 Pfam Radical SAM superfamily 91 249 IPR007197 GO:0003824|GO:0051536
Lan13g0108 378 PANTHER BIOTIN SYNTHASE 28 373 IPR002684 GO:0004076|GO:0009102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0108 Lan-Chr13 632736 637000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0108 K01012 - gmx:100808225 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0057 7 284680 288141 Lan13g0108 13 632736 637000 LSH