Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0054 ATGGATCCCTTCCTCTCTAATTCCAACGATGCCGAAGAGGACCACCACCAATTTCAGCCTCCACCTCCCACCACCACCACCACCACCGCCGAAATCTCAACCCAACCCCACATCGATGTCAAATCAGAGATTGATCCCTCCGACAACGAACCTTCTTCCGAAGAAGAGCCTAACAAATCCCCAAAACGCTCTCTCGGTAACGAACACGAAGAGAACCTTCCGAAGAAGCAGAAGAATCTTTCATCTCTCACCGTGGAGGCCGAATCTCCGTCTACACTGCCGCCCGATTCCGTTATCAACAATAACGGTTCCGTCAATGCTGCTATTACATTGCCGTTAGTCACGTCGAATTCGAATTCGAAGAAGTCGAAGAAGAAGAACAACAACATGTGGGCGACGAAATCGAAGAAAGGGAAGAAGAAAAAGAGTAAGGTCAACAACAACAACAACCATCCCAAAACAGAAGACACCGTGCTGATAACACCTGTCCAGAGGTTCCCGGACAAGAGCGACGACATACCGGAGATGAAAATCTGCTTGTCCAAGGTGTTCAAAGCAGAGAAAGTGGAATTAAGCGAGGATCGAATGAGTGCAGGGAGCACCAAGGGTTATAGAATGGTCAGGGCAACAAGAGGGGTTGTGGAAGGGGCGTGGTACTTTGAGATCAAGGTTCTGAAATTGGGTGAAACAGGTCACACTCGTTTGGGTTGGTCCACCGAGAAGGGTGATTTGCAAGCACCGGTTGGGTTTGATGGGAATAGTTTTGGGTATAGGGACATTGATGGGAGTAAGATACATAAGGCTTTGAGAGAGGGGTATGGAGAGGCTGGGTACAAGGAAGGTGATGTTATTGGCTTCTATATCAATTTGCCCGACGGAGATAAACACGCACCAAAAGAACCACATTTGGTTTGGTATAAGGGCCAAAGATATGTTCATGCTCAAGATGCTAAGGAAGATCCAGCAAAACTAGTGCCTGGAAGTGAGATATCATTCTTTAAAAATGGTGTATGCCAAGGTGTAGCTTTCAAGGATCTTTATGGTGGTCGTTATTACCCTGCTGCTTCAATGTATACTCTCCCTAATGAGCCAAACTGCACAGTCAAGTTCAACTTTGGCCCTGACTTTGAATTCTTTCCTGGGGATTTCAATGACCGGCCGATTCCCAAGCCAATGATTGAAGTTTCCTATCATGGTTTTGACAATCGGGTTGAAAATGGAGAGTCTACTGATAAGAAATCCTCCAAAGAGTGA 1254 0.4649 MDPFLSNSNDAEEDHHQFQPPPPTTTTTTAEISTQPHIDVKSEIDPSDNEPSSEEEPNKSPKRSLGNEHEENLPKKQKNLSSLTVEAESPSTLPPDSVINNNGSVNAAITLPLVTSNSNSKKSKKKNNNMWATKSKKGKKKKSKVNNNNNHPKTEDTVLITPVQRFPDKSDDIPEMKICLSKVFKAEKVELSEDRMSAGSTKGYRMVRATRGVVEGAWYFEIKVLKLGETGHTRLGWSTEKGDLQAPVGFDGNSFGYRDIDGSKIHKALREGYGEAGYKEGDVIGFYINLPDGDKHAPKEPHLVWYKGQRYVHAQDAKEDPAKLVPGSEISFFKNGVCQGVAFKDLYGGRYYPAASMYTLPNEPNCTVKFNFGPDFEFFPGDFNDRPIPKPMIEVSYHGFDNRVENGESTDKKSSKE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0054 417 MobiDBLite consensus disorder prediction 127 147 - -
Lan7g0054 417 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 12 398 IPR037353 GO:0048188|GO:0051568
Lan7g0054 417 Gene3D - 176 390 IPR043136 -
Lan7g0054 417 MobiDBLite consensus disorder prediction 115 155 - -
Lan7g0054 417 ProSiteProfiles B30.2/SPRY domain profile. 158 377 IPR001870 -
Lan7g0054 417 SMART SPRY_3 215 376 IPR003877 GO:0005515
Lan7g0054 417 Pfam SPRY domain 218 293 IPR003877 GO:0005515
Lan7g0054 417 SUPERFAMILY Concanavalin A-like lectins/glucanases 178 380 IPR013320 -
Lan7g0054 417 MobiDBLite consensus disorder prediction 77 100 - -
Lan7g0054 417 MobiDBLite consensus disorder prediction 1 100 - -
Lan7g0054 417 MobiDBLite consensus disorder prediction 41 76 - -
Lan7g0054 417 CDD SPRY_Ash2 189 376 - -
Lan7g0054 417 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0054 Lan-Chr7 263918 267373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0054 K14964 - tcc:18589877 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0054 7 263918 267373 Lan13g0105 13 618144 621367 LSH