Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0105 ATGGATGCGCTATTAGCAACTTACAAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAACTATTCGATGCTCCACCCACCACCACCGCTACCGATGCCGCCACCGTCGCCGACACCGAATCAATCGACGTACCTCCCGAACCACAAATCGATGTTAAATCAGAGCCTTATCCCTCCGATGAACCCTCCGACGAAGCTTCCGAAGGCTCCGGAGAGCCAAATAAATCCCCGAAACGCTCTTCCGGTAACGAAGATGACGAAGATGAAGAGCCTCTTACGAAGAAGCAGAAGAATCTTTCATCTCTAACTGCAAAAGATGAATATCCGTCTACGCCTATATTATTGCCTGACGCCGTTAACGACAATAACGGTTTTGTCGTTGCTGCCGCGACAGCGCCGTTAACGGTAACGAATTCGAAGAAGTCAAAGAAGAAGAACAATAACGTGTGGGCCACGAAATCAAAGAAAGGGAAGAAGAAGAGTAAGATCATCAATAACAATAAAAACAATAATAACCATGCCAATGGCGAAGACACGGTGCTGATAACACCGGTCCCGAGGTTTCCGGACAAAAATGATGACACAGCGGAGATGAATATCTGCTTATCGAAGGTTTACAAAGCGGAAAAGGTGGAATTGAGTGATGATAGAATGAGTGCAGGGAGTACCAAGGGTTATAGAATGGTTAGGGCAACGAGAGGGGTTGTGGAAGGGGCATGGTATTTCGAGATCAAGATTGTGAAATTGGGGGAAACGGGTCACACACGTTTGGGTTGGTCCACTGAGAGGGGTGATTTGCAGGCACCAGTTGGGTTCGACGGGAATAGTTTCGGGTATAGGGATATTGATGGGAGTAAGGTACATAAAGCTTTGAGAGAGAAATATGGAGAGGAAGGGTATAAGGAAGGTGATGTTATTGGATTTTATATTAATTTGCCTGATGGAGAGAAATATGCACCAAAAACACCACATTTGGTTTGGTATAAAGGCCAGAGATATGCTTGTGGTCAAGATTCTAAGGAAGATCCAGCTACAATAGTGCCTGGAAGTGAGATATCTTTCTTTAAAAATGGTGTGTGCCAAGGTGTAGCTTTCAAGGATCTTTATGGTGGTCGTTTTTACCCTGCTGCTTCAATGTATACTCTCCCCAATGAGCCAAACTGCACAGTCAAGTTCAACTTCGGCCCTGACTTTGAATTCTTTCCTGAGGATTTCAATGAACGGCCGATTCCCAAGCCAATGATTGAAGTTCCTTATCATGGTTTTGACAATCAAGTTGAAAATGGAGAGTCTACTGACAAGAAATTCTCCAAAGAGTGA 1332 0.4444 MDALLATYKDEEEEEEEEEEEEDELFDAPPTTTATDAATVADTESIDVPPEPQIDVKSEPYPSDEPSDEASEGSGEPNKSPKRSSGNEDDEDEEPLTKKQKNLSSLTAKDEYPSTPILLPDAVNDNNGFVVAAATAPLTVTNSKKSKKKNNNVWATKSKKGKKKSKIINNNKNNNNHANGEDTVLITPVPRFPDKNDDTAEMNICLSKVYKAEKVELSDDRMSAGSTKGYRMVRATRGVVEGAWYFEIKIVKLGETGHTRLGWSTERGDLQAPVGFDGNSFGYRDIDGSKVHKALREKYGEEGYKEGDVIGFYINLPDGEKYAPKTPHLVWYKGQRYACGQDSKEDPATIVPGSEISFFKNGVCQGVAFKDLYGGRFYPAASMYTLPNEPNCTVKFNFGPDFEFFPEDFNERPIPKPMIEVPYHGFDNQVENGESTDKKFSKE* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0105 443 MobiDBLite consensus disorder prediction 150 167 - -
Lan13g0105 443 MobiDBLite consensus disorder prediction 141 182 - -
Lan13g0105 443 CDD SPRY_Ash2 215 402 - -
Lan13g0105 443 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 24 427 IPR037353 GO:0048188|GO:0051568
Lan13g0105 443 MobiDBLite consensus disorder prediction 82 99 - -
Lan13g0105 443 MobiDBLite consensus disorder prediction 7 27 - -
Lan13g0105 443 SUPERFAMILY Concanavalin A-like lectins/glucanases 202 406 IPR013320 -
Lan13g0105 443 MobiDBLite consensus disorder prediction 168 182 - -
Lan13g0105 443 Pfam SPRY domain 354 399 IPR003877 GO:0005515
Lan13g0105 443 Pfam SPRY domain 244 320 IPR003877 GO:0005515
Lan13g0105 443 ProSiteProfiles B30.2/SPRY domain profile. 184 403 IPR001870 -
Lan13g0105 443 Coils Coil 1 28 - -
Lan13g0105 443 MobiDBLite consensus disorder prediction 1 113 - -
Lan13g0105 443 SMART SPRY_3 241 402 IPR003877 GO:0005515
Lan13g0105 443 Gene3D - 202 417 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0105 Lan-Chr13 618144 621367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0105 K14964 - gmx:100816796 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0054 7 263918 267373 Lan13g0105 13 618144 621367 LSH