Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0025 ATTATTCCTTCCAAGTTGGCAGTCTTCATACGCATTCTCATAACTTCAAGGTTGACTCAGTCACCCACAAACTTCTTTAAATTCTGTCCCAACCCTTCATTTCCCTCACTCTCCATCACTTTCTCCTTTTGCTTCTCTCCACAAAGAAATTATACTTGCAACGTCAAACTTCTTGGAGAACATAACATTATGTTCCTCACAGGCTTCACCATCTTTTTCCTTAGTTGTATAACCATTCACCTTAACTTCTGTCTTTCAACTATTCCTTCTTCACTAAACTCACTCCCCCTTGGTGGACATTTCAGTTTTGATGAAGTTACTCTTAGCCATGCAGCAACAGACTTTGGCAACAGATACCAATATAATCCAATGGCAGTGCTGCATCCAGAATCAGTTTCTGATATTGCAGCCACAATAAAGCATATCTGGCTCATGGGACCAAGCTCGCAACTCACCGTTGCAGCCAGAGGCCATGGCCACTCACTCCATGGCCAGGCACAAGCTCATGGAGGTGTTGTGATCAACATGGAATCACTCAAGGTCCCAGAAATGCAGGTACATGTAGGAAATTCTCCATATGTGGATGTCTCAGGTGGTGAGTTGTGGATAAACATCCTGCACGAGACTTTAAAATATAGGTTGGCACCAAGATCATGGACAGATTATTTGCATCTGACAGTTGGTGGCACCCTCTCTAATGCCGGAGTCAGCGGGCAGGCATTTCGGCATGGTCCTCAGATAAGTAATGTGAAGCAGCTGGAGATTGTTACAGGAACAGGGGAGGTGGTAAATTGTTCCAAGGAGCAGAATGAGGAGCTCTTTCACAGTGTTCTTGGGGGGCTTGGCCAGTTTGGCATTATAACCAGGGCAAGAATTTTGCTGGAACCAGCACCTGACATGGTAAAATGGATAAGAGTGCTATACTCAGATTTCACAGCATTCACAAGAGACCAAGAGCAATTAATATCAGCAGAAAACTCATTTGATTACATTGAAGGATTTGTGATAATAAACAGAACTGGTCTGCTAAATAACTGGAGATCATCCTTCAACCCACAAGACCCGGTTCAGGCTAGTCAGTTCAACTCAGATGGAAAGACTCTCTATTGCCTAGAATTAGCCAAGTATTTCACCTTGGAACAAATCAATTTAGTAAATCAGGAAGTTGAGATGCACTTGTCCTATTTAAACTACATTCCATCAACTCTTTTTCTAACAGAAGTCAAATACCTAGACTTCTTAGACAGGGTGCATGTATCTGAGGTCAAATTGCGTTCAAAAGGTTTGTGGGATGTACCACACCCATGGCTTAATCTTTTTATACCAAAAAGCAAAATACACCAATTTGCACAAGTAGTCTTCGGGAATATCCTAACAGAAACAAGCAATGGCCCTGTCCTTATCTACCCAGTAAATAAATCAAAGTGGGACAACAGAACTTCTGTTGTTATTCCAGAGGAAGACATTTTCTACCTAGTGGCATTCCTTACTTCTGCAGTTCCATCTTCCAATGGAACTGATGGCTTAGAATACATAATAAGTCAGAACAAAAGAATTTTAGAATACTGTGAAGGATCACAACTTGGAGTAAAGCAATATTTGCCACACTACAAAACACAGGAAGAATGGAGGGCCCATTTTGGTCTTCAGTGGGAGGCTTTTGTGCAAAGAAAATATATTAATGACCCATTGGCAATACTTGCTCCTGGCCAGAGAATATTTCAAAAAGCAATAACCTTCTCATGA 1746 0.4158 IIPSKLAVFIRILITSRLTQSPTNFFKFCPNPSFPSLSITFSFCFSPQRNYTCNVKLLGEHNIMFLTGFTIFFLSCITIHLNFCLSTIPSSLNSLPLGGHFSFDEVTLSHAATDFGNRYQYNPMAVLHPESVSDIAATIKHIWLMGPSSQLTVAARGHGHSLHGQAQAHGGVVINMESLKVPEMQVHVGNSPYVDVSGGELWINILHETLKYRLAPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQISNVKQLEIVTGTGEVVNCSKEQNEELFHSVLGGLGQFGIITRARILLEPAPDMVKWIRVLYSDFTAFTRDQEQLISAENSFDYIEGFVIINRTGLLNNWRSSFNPQDPVQASQFNSDGKTLYCLELAKYFTLEQINLVNQEVEMHLSYLNYIPSTLFLTEVKYLDFLDRVHVSEVKLRSKGLWDVPHPWLNLFIPKSKIHQFAQVVFGNILTETSNGPVLIYPVNKSKWDNRTSVVIPEEDIFYLVAFLTSAVPSSNGTDGLEYIISQNKRILEYCEGSQLGVKQYLPHYKTQEEWRAHFGLQWEAFVQRKYINDPLAILAPGQRIFQKAITFS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0025 581 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 298 574 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lan7g0025 581 SUPERFAMILY FAD-linked oxidases, C-terminal domain 298 574 IPR016164 GO:0003824|GO:0050660
Lan7g0025 581 ProSiteProfiles PCMH-type FAD-binding domain profile. 119 297 IPR016166 GO:0071949
Lan7g0025 581 Gene3D - 300 533 IPR016170 -
Lan7g0025 581 Gene3D - 109 574 IPR016167 -
Lan7g0025 581 Pfam FAD binding domain 123 266 IPR006094 GO:0050660
Lan7g0025 581 Gene3D - 176 299 IPR016169 -
Lan7g0025 581 PANTHER GULONOLACTONE OXIDASE 52 578 - -
Lan7g0025 581 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 52 578 - -
Lan7g0025 581 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 123 158 IPR006093 GO:0016491
Lan7g0025 581 SUPERFAMILY FAD-binding/transporter-associated domain-like 97 296 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0025 Lan-Chr7 133332 136055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0025 K00279 - gmx:100808619 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0025 7 133332 136055 Lan13g0058 13 317989 320842 LSH