Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0058 ATGTTCCTAAGAGGCTTCACCATAATCATTCACCTTAACTTTTGTCTTTCAACTATTCCCTTTTCACTAAACTCACTTCCCCTTGGTGGAAACTTCAGTTTTGATGAAGTTACACTTAGCCATGCAGCCACAGACTTTGGCAACAGATACAAATACAATCCAATGGCAGTGTTGCATCCAGAATCAGTTTCAGATATTGCAGCCACAATAAAGCATATCTGGCTAATGGGACATAGGTCTCAACTCACTGTTGCAGCCAGAGGCCATGGCCACTCACTCCAAGGCCAAGCACAGGCTCATGGAGGAGTTGTGATCAACATGGAATCACTTAAGGTTCCACAAATGAAGGTACATGTAGGAAATTCTCCATATGTGGATGTCTCAGGTGGTGAGTTGTGGATAAACATTTTGCATGAGACTTTGAAATATGGGTTGGCACCAAGATCATGGACTGATTACTTGCATCTCACGGTTGGTGGAACTCTCTCTAATGCCGGAGTCAGCGGGCAAGCGTTTCGGCATGGTCCACAGATTAGTAATGTTCAGCAGCTGGAGATTGTTACAGGAACAGGGGATATGGTAAACTGTTCCAAGGAGCAGAATGGTGAGCTCTTTCACAGTGTTCTTGGTGGGCTTGGCCAGTTTGGAATTATAACCAGGGCCAGAATTTTGCTTGAACCAGCACCTGACATGGTAAAATGGATAAGAGTGCTATATTCAGATTTCACAGCATTCACAAGAGACCAAGAACAATTAATATCAGAAGAAAAGTCATTTGATTACATTGAAGGATTTGTGATAATAAACAGAACTGGACTACTAAATAATTGGAGATCATCCTTCAAACCACAAGATCCAGTTCAAGCTAGTCAATTCAACTCAGATGGAAAAACTCTATACTGTCTAGAATTAGCCAAGTACTTCACCTTTGACCAAATCAATGTAGTAAATCAGGAAGTTGAGAAACATTTGTCACACTTAAACTACATTGCATCAACTCTTTTTGTAACAGAAGTTACATACATAGAGTTCTTAGATAGGGTGCATGTATCTGAGGTCAAATTGCGTGCAAAAGGCTTGTGGAATATACCACACCCATGGCTCAATCTTTTTATACCAAAGAGCAAAATACACCATTTTGCACAAGTGGTCTTTGGGAACATCCTTACAGAAACAAGCAATGGCCCAGTCCTTATCTACCCACTAAATAAATCAAAGTGGGACAACAGAAGTTCTATTGTTATTCCAGAGGAAGAGATTTTCTACTTAGTGGCATTTCTAGCCTCTGCAGTTCCATCTTCCAATGGAAATGATGGCTTAGAACATATAATAAGTCAGAACAAAAGAATTTTAGAATACTGTGAAAGAACAAATCTTGGAGTAAAGCAATATTTGCCTCACTACAAGTCACATGAAGAATGGAGGAGCCATTTTGGTCCTCACTGGGAGGCTTTTGTGCAAAGAAAATATGTTTATGACCCTTTGGCAATACTTGCTCCTGGCCAAAGAATATTTCAAAAATCAATAACCTAG 1533 0.4012 MFLRGFTIIIHLNFCLSTIPFSLNSLPLGGNFSFDEVTLSHAATDFGNRYKYNPMAVLHPESVSDIAATIKHIWLMGHRSQLTVAARGHGHSLQGQAQAHGGVVINMESLKVPQMKVHVGNSPYVDVSGGELWINILHETLKYGLAPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQISNVQQLEIVTGTGDMVNCSKEQNGELFHSVLGGLGQFGIITRARILLEPAPDMVKWIRVLYSDFTAFTRDQEQLISEEKSFDYIEGFVIINRTGLLNNWRSSFKPQDPVQASQFNSDGKTLYCLELAKYFTFDQINVVNQEVEKHLSHLNYIASTLFVTEVTYIEFLDRVHVSEVKLRAKGLWNIPHPWLNLFIPKSKIHHFAQVVFGNILTETSNGPVLIYPLNKSKWDNRSSIVIPEEEIFYLVAFLASAVPSSNGNDGLEHIISQNKRILEYCERTNLGVKQYLPHYKSHEEWRSHFGPHWEAFVQRKYVYDPLAILAPGQRIFQKSIT* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0058 510 SUPERFAMILY FAD-linked oxidases, C-terminal domain 229 505 IPR016164 GO:0003824|GO:0050660
Lan13g0058 510 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 229 505 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lan13g0058 510 Pfam FAD binding domain 54 197 IPR006094 GO:0050660
Lan13g0058 510 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 54 89 IPR006093 GO:0016491
Lan13g0058 510 Gene3D - 231 464 IPR016170 -
Lan13g0058 510 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 7 508 - -
Lan13g0058 510 PANTHER GULONOLACTONE OXIDASE 7 508 - -
Lan13g0058 510 Gene3D - 40 505 IPR016167 -
Lan13g0058 510 ProSiteProfiles PCMH-type FAD-binding domain profile. 50 228 IPR016166 GO:0071949
Lan13g0058 510 Gene3D - 107 230 IPR016169 -
Lan13g0058 510 SUPERFAMILY FAD-binding/transporter-associated domain-like 28 227 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0058 Lan-Chr13 317989 320842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0058 K00279 - gmx:100808619 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0025 7 133332 136055 Lan13g0058 13 317989 320842 LSH