Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2183 ATGCAGAAACCACAACAAACACAACCCGCAGACTTTGCTCTCAAGGAAACCTCACCAAACATTGGAGGTATCAAAAAGGACAAGTTTTCATGCACTTATGACCTTGTTGAACAAATGTTGTATGTCTATGTTCATGTTGTCAAAGCAAAGGACTTGCCTGGTAACATTGATTCCTATGTTGAAGTACAGCTCGGAAACTACAAAGGCCACACCAAGAATTTTGAGAACAAGTCCAATCCTGAGTGGAATCAGGTTTTTGCCTTCTCCAAAGATAGAATTCAAGCTTCACTTTTGGAGGTGGTGATAAAAGATAAGGATGAGTTGGTGGGGGGAGTTTTTATTGATCTGAATGATATCCCGAAACGCGTGCCGCCGGATAGTCCATTGGCTTCACAGTGGTATAGGATGGAAGATAGGAAAGCTGAGAAAAGAAAGGGAGAGTTAATGCTTGCAGTTTGGATAGGAACACAAGCAGATGAGGCATTTTCTGATGCATGCCATTCAGATGCAGCAATGATTGGTCCTGAAGGGGTTGCAAATATAAGATCGAAGGTGTATCTTTCACCTAAGCTTTGGTATGTAAGGGTCAATGTTATTGAAGCACAGGACTTACTACCGAGTGATAAAAGCCGGTATCCGGAAGCTTTCGTAAAGGTTAATCTAGGGAGCCAGTCTTTGAAAACTAGAATATCTCAAAGTAAAACCTTAAATCATATGTGGAATGAGGACTTGATGTTTGTTGTTGCTGAACCATTTGAAGATTCATTGGTTCTTACAGCTGAAGACAAGGTTGGACCAAACAAAGATGAAATCCTAGGAAAGTGTGTGATTCCTTTGCATCTTATGCCAAGGAGGTTAGACCATAAGCCTGTGAACACAAAGTGGTTCAATCTTGAAAAGCATGGAGGGGAACAGAAAAAAGAGGTCAAGTTTCCGAGTAGGATACATTTGAGGGTGTGCTTGGATGGAGGGTATCATGTGTTGGATGAACCGGCTCACTATAGTAGTGATCTAAGGCCAACCGAAAAGCAACTTCAGAAGCCGAGCATTGGAATTCTTGAAGTAGGTATTATAAGTGCAATAGGACTAATGCCCATGAAAACAAGAGATGGTCATGGAACTACAGATGCTTATTGTGTGGCCAAGTATGGTCAGAAATGGATCCGAACTCGGACAATTGTAGATAGTCTTGCTCCAAAATGGAATGAGCAATACACTTGGGAAGTTTATGATCCATGTACTGTTATAACAATTGCGGTTTTCGATAATGGTCATATGCAAAAATCCGAGGGAGATAAATTTGATGGATCAAAGGATTCAAGAATAGGGAAGGTGAGAATAAGGTTATCTACTCTTGCAACTGATAGAGTTTACACACACTCATATCCTCTCTTAGTACTGCAAGATTCGGGTTTGAAGAAAATGGGAGAAGTGCAACTAGCTGTAAGGTTCACAAGCTTATCTTTGATAAGCATGCTTTCTATATACTCGCAACCAATGTTTCCAAATATGCACCACATCTATCCGTTACCATCCATGGTTAAAGACGGTTTAAGGCATCACGCAACGCAGATTGTGTCAATGAGGTTGAGCAGGTCCGAGCCACCACTGAGGAAAGAGGTAGTTGAGTACATGCTTGATGTGGATTCACATATGTGGAGTGTGAGAAAGAGCAAAGCAAATTTCTTAAGAATAATGAAAGTTCTAGGTGGATTGGTAATGATTGGGAGATGGTTTGATAACATCTGCAATTGGAAAAACCCTCTCATATCAATACTTATTCATAACATCTTCATGATACTTGTTCTTTACCCGGGACTAATACTTCCCTCAATTTTCATTTCGATGTTTGTTATCGGAATATGGAATTTCAGATTTAGGCCAAGGCACCCTCCTCATATGGACAATAGACTATCTCATGCCGATGTTGCTCAACCTGATGAATTAGACGAAGAGTTTGATACATTCCCAACTTCGAAGTCATTGGATATTGTTAAAATGAGGTATGATCGTTTACGATGCGTCGCAGGGAGGGCGCAAACTGTTCTAGGTGACCTTGCTAGTCAAGGAGAAAGGTTTCAAAATCTTCTAAGTTGGAGAGATCCAAGGGCTACCACTCTCTTTGTGACATTCTGTCTCATTGCTGCCATTGTTCTCTTTGTTACTTCATTTCAGATTGTGATTCTTCTAACTGGCTTTTATGTTCTACGGCATCCGAAATTCCGAAATAAACTTCCATCAGTACCATTCAACTTCTTTAGAAGGTTGCCTGCTAGAGTAGACAGCATATTCTAA 2295 0.4061 MQKPQQTQPADFALKETSPNIGGIKKDKFSCTYDLVEQMLYVYVHVVKAKDLPGNIDSYVEVQLGNYKGHTKNFENKSNPEWNQVFAFSKDRIQASLLEVVIKDKDELVGGVFIDLNDIPKRVPPDSPLASQWYRMEDRKAEKRKGELMLAVWIGTQADEAFSDACHSDAAMIGPEGVANIRSKVYLSPKLWYVRVNVIEAQDLLPSDKSRYPEAFVKVNLGSQSLKTRISQSKTLNHMWNEDLMFVVAEPFEDSLVLTAEDKVGPNKDEILGKCVIPLHLMPRRLDHKPVNTKWFNLEKHGGEQKKEVKFPSRIHLRVCLDGGYHVLDEPAHYSSDLRPTEKQLQKPSIGILEVGIISAIGLMPMKTRDGHGTTDAYCVAKYGQKWIRTRTIVDSLAPKWNEQYTWEVYDPCTVITIAVFDNGHMQKSEGDKFDGSKDSRIGKVRIRLSTLATDRVYTHSYPLLVLQDSGLKKMGEVQLAVRFTSLSLISMLSIYSQPMFPNMHHIYPLPSMVKDGLRHHATQIVSMRLSRSEPPLRKEVVEYMLDVDSHMWSVRKSKANFLRIMKVLGGLVMIGRWFDNICNWKNPLISILIHNIFMILVLYPGLILPSIFISMFVIGIWNFRFRPRHPPHMDNRLSHADVAQPDELDEEFDTFPTSKSLDIVKMRYDRLRCVAGRAQTVLGDLASQGERFQNLLSWRDPRATTLFVTFCLIAAIVLFVTSFQIVILLTGFYVLRHPKFRNKLPSVPFNFFRRLPARVDSIF* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2183 764 Pfam Plant phosphoribosyltransferase C-terminal 609 764 IPR013583 -
Lan6g2183 764 SMART C2_3c 41 128 IPR000008 -
Lan6g2183 764 SMART C2_3c 352 461 IPR000008 -
Lan6g2183 764 SMART C2_3c 193 291 IPR000008 -
Lan6g2183 764 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 7 763 - -
Lan6g2183 764 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 192 343 IPR035892 -
Lan6g2183 764 CDD C2C_MCTP_PRT_plant 193 340 - -
Lan6g2183 764 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 169 IPR035892 -
Lan6g2183 764 ProSiteProfiles C2 domain profile. 175 296 IPR000008 -
Lan6g2183 764 Gene3D C2 domain 37 154 IPR035892 -
Lan6g2183 764 Gene3D C2 domain 334 488 IPR035892 -
Lan6g2183 764 Gene3D C2 domain 179 321 IPR035892 -
Lan6g2183 764 Pfam C2 domain 351 464 IPR000008 -
Lan6g2183 764 Pfam C2 domain 192 298 IPR000008 -
Lan6g2183 764 Pfam C2 domain 42 134 IPR000008 -
Lan6g2183 764 ProSiteProfiles C2 domain profile. 23 134 IPR000008 -
Lan6g2183 764 CDD C2B_MCTP_PRT_plant 41 156 - -
Lan6g2183 764 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 7 763 - -
Lan6g2183 764 CDD C2D_MCTP_PRT_plant 352 481 - -
Lan6g2183 764 ProSiteProfiles C2 domain profile. 334 462 IPR000008 -
Lan6g2183 764 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 351 486 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2183 Lan-Chr6 32216730 32219353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2183 1 764 Lipid Metabolism Gene Families AT3G57880 70.475 0.0 1167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2183 - - gmx:100809753 1225.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2183 6 32216730 32219353 Lan13g0291 13 1883485 1886581 PCT
Lan13g0291 13 1883485 1886581 Lan6g2183 6 32216730 32219353 PCT