Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0291 ATGCTGAAGCCGCCACAATCGCAAGACTTTGCCCTGAAGGAGACCTCACCCAACATTGGGGCAGGGTCAGTGACAGGGAACAAGAACAAGCTATCCTCTACCTATGACCTGGTTGAACAGATGCAATACCTCTATGTCCGAGTGGTGAAGGCCCACGATTTGCCTGCAACGGATATAACTGGCAGTCTTGATCCATATGTTGAAGTGAAGCTTGGAAACTACAAGGGACGAACCAGGCATTTCGAGAAGAAGTCCAATCCTGAGTGGAATCAGGTCTTTGCTTTCTCCAAAGATCGGATTCAAGCTTCGGTTTTGGAGGTGGTTGTCAAAGATAAAGACGTTATTTCAGATGACTTTGTAGGGAGGGTGTGGTTTGATCTGAATGAGATTCCAAAACGTATTCCCCCAGATAGCCCTTTGGCTCCACAGTGGTATAGGCTGGAGGATCGAAAAGGCCTTAAAGTTAAGGGAGAGTTAATGCTTGCAGTTTGGATGGGAACTCAAGCAGATGAGACATTTCCTGATTCATGGAATTCTGATGCAGCAACCATTAGCTATGACGAGATTGCGAACATAAGATCAAAAGTTTACCTCTCACCCAAGCTTTGGTATGTTAGGGTTAATGTAATTGAGGCTCAGGACTTGATACCAAGTGACAAGACCCGGTATCCTGAAGTTTATGTGAAGGCTAATCTAGGGAATCGGATCTTAAGAACTAGAGTATCCCAAAGTAAGACCTTGAATCCCATCTGGAATGAGGACTTGATGTTTGTTACTGCTGAGCCATTCGAGGAGCCTTTAGTTCTGTCTGTGGAAGATAGGTTTGGACCGAATAAAGATGAAATCCTGGGAAGGTGTGTGATTCCGTTACACATAGTGCAAAGGAGGTTAGACCATAAGCCTGTGAACACTAGGTGGTTTAATCTTGAGAAGCATGTGGTTGTTGAAGGGGAGAAGAAGGAGACCAAATTTTCAAGTAGGATACATTTAAGGATATGTTTGGATGGAGGGTACCATGTGTTGGATGAGTCTACTCATTACAGTAGTGATCTTAGGCCAACTGCCAAGCAGCTATGGAAGTCTAGCATTGGAATTCTAGAAGTCGGGATTATAAGTGCCCATGGTCTTATGCCAATGAAGACAATAGATGGTAGAGGAACCACAGATGCTTATTGTGTAGCGAAATATGGTCAGAAGTGGATCCGGACGAGGACAATTGTAGATAGCTTTGCACCAAAGTGGAATGAGCAGTACACTTGGGAAGTATTTGATCCATCTACTGTTATCACAGTAGGGGTCTTTGATAATGGTCATTTACATGGAGGAGACAAATCTGGTGGATTAAAGGATTCAAGGATAGGGAAGGTGAGAATTAGGCTATCTACTCTTGAAGCTGGTAGAGTTTACACACACTCTTATCCTCTTATAGTGCTGCATAATTCCGGTGTGAAGAAAACAGGAGAAGTGCAGTTGGCTGTGAGGTTCACAAACTCATCTTTCATCAATATGATGTTTATGTATTCCCAACCACTGTTGCCAAAGATGCACTACATCCATCCTCTTTCTGTGATTCAGCTAGACAGTCTGAGGCATCAGGCCATGCAGATTGTGTCGATGAGGTTGATCAGGGCCGAGCCACCGCTAAGGAAAGAGGTTGTGGAATACATGCTTGATGTGGATTCACATATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGAATAATGAAAGTTCTAGGAGGGTTGATAGCCTTTGGAAGGTGGTTTGATCAAATATGCAATTGGAAAAACCCAATCACAACCATACTAATTCACACTCTTTTCATAATATTGGTTCTTTATCCAGAGCTAATACTTCCCACAATTTTCTTGTACCTGTTCTTGATTGGAATTTGGAACTTCAGATGGAGGCCAAGACACCCTCCACACATGGACACTAGACTTTCTCATGCCGATGCTGCTCATCCTGATGAATTAGATGAAGAGTTTGATACATTCCCAACTTCCCGTCCACCAGATATCGTTAACATGAGATATGATCGTTTAAGAAGCATTGCAGGAAGAGTCCAGAGTGTTGTAGGTGACCTGGCAACTCAAGGAGAAAGGTTTCAAAGTCTCCTAAGCTGGAGAGATCCAAGGGCTACTTCTCTCTTTTTAACATTCTGTTTTATTGCTGCTATAGTTCTCTATGTTACCCCCTTTCAGGTTTTATGCTTTCTCTATGGCTTCTATGTGCTTAGGCATCCGAGATTCCGCCACAAACTTCCATCAGTACCTCTCAACTTCTTTAGAAGGTTGCCTGCTAGATCAGACAGCATGTTGTAG 2328 0.4326 MLKPPQSQDFALKETSPNIGAGSVTGNKNKLSSTYDLVEQMQYLYVRVVKAHDLPATDITGSLDPYVEVKLGNYKGRTRHFEKKSNPEWNQVFAFSKDRIQASVLEVVVKDKDVISDDFVGRVWFDLNEIPKRIPPDSPLAPQWYRLEDRKGLKVKGELMLAVWMGTQADETFPDSWNSDAATISYDEIANIRSKVYLSPKLWYVRVNVIEAQDLIPSDKTRYPEVYVKANLGNRILRTRVSQSKTLNPIWNEDLMFVTAEPFEEPLVLSVEDRFGPNKDEILGRCVIPLHIVQRRLDHKPVNTRWFNLEKHVVVEGEKKETKFSSRIHLRICLDGGYHVLDESTHYSSDLRPTAKQLWKSSIGILEVGIISAHGLMPMKTIDGRGTTDAYCVAKYGQKWIRTRTIVDSFAPKWNEQYTWEVFDPSTVITVGVFDNGHLHGGDKSGGLKDSRIGKVRIRLSTLEAGRVYTHSYPLIVLHNSGVKKTGEVQLAVRFTNSSFINMMFMYSQPLLPKMHYIHPLSVIQLDSLRHQAMQIVSMRLIRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLGGLIAFGRWFDQICNWKNPITTILIHTLFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRPPDIVNMRYDRLRSIAGRVQSVVGDLATQGERFQSLLSWRDPRATSLFLTFCFIAAIVLYVTPFQVLCFLYGFYVLRHPRFRHKLPSVPLNFFRRLPARSDSML* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0291 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 180 IPR035892 -
Lan13g0291 775 MobiDBLite consensus disorder prediction 1 25 - -
Lan13g0291 775 CDD C2C_MCTP_PRT_plant 204 353 - -
Lan13g0291 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 364 504 IPR035892 -
Lan13g0291 775 Pfam C2 domain 203 309 IPR000008 -
Lan13g0291 775 Pfam C2 domain 43 145 IPR000008 -
Lan13g0291 775 Pfam C2 domain 364 475 IPR000008 -
Lan13g0291 775 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 5 775 - -
Lan13g0291 775 ProSiteProfiles C2 domain profile. 25 145 IPR000008 -
Lan13g0291 775 ProSiteProfiles C2 domain profile. 184 307 IPR000008 -
Lan13g0291 775 CDD C2B_MCTP_PRT_plant 43 167 - -
Lan13g0291 775 Pfam Plant phosphoribosyltransferase C-terminal 620 775 IPR013583 -
Lan13g0291 775 SMART C2_3c 365 472 IPR000008 -
Lan13g0291 775 SMART C2_3c 204 302 IPR000008 -
Lan13g0291 775 SMART C2_3c 43 139 IPR000008 -
Lan13g0291 775 Gene3D C2 domain 187 334 IPR035892 -
Lan13g0291 775 Gene3D C2 domain 26 165 IPR035892 -
Lan13g0291 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 203 355 IPR035892 -
Lan13g0291 775 CDD C2D_MCTP_PRT_plant 365 492 - -
Lan13g0291 775 MobiDBLite consensus disorder prediction 9 25 - -
Lan13g0291 775 ProSiteProfiles C2 domain profile. 347 473 IPR000008 -
Lan13g0291 775 Gene3D C2 domain 362 499 IPR035892 -
Lan13g0291 775 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0291 Lan-Chr13 1883485 1886581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0291 1 775 Lipid Metabolism Gene Families AT3G57880 81.830 0.0 1350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0291 - - gmx:100788273 1387.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2183 6 32216730 32219353 Lan13g0291 13 1883485 1886581 PCT
Lan13g0291 13 1883485 1886581 Lan6g2183 6 32216730 32219353 PCT