Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2130 ATGACTTCAATTATAGTGGTTTTTGACTTTGACTCAACAATCATTGAATGTGATAGTGATAACTGGGTACTTGATGAATTTGGTTTAACTGAAAAGTTCTATAAGCTTCTTCCTACTATGCTTTGGAATCCTCTCATGGATAAGATGATGAGTGAACTTCATTCACAAGGAAAAACCATTGAAGACATTGTACAAGTTTTGCACCGAACTCCAATACATCCCTGCATTGTCCCTGCCATTGAGGCAGCATATTCCCTTGGGTGTGAGCTTAAGATTGTGAGTGATGCAAATATTTTCTTCATTGAAACAATTTTGAAGCATCATGGTGTGTGGAATTGTTTCTCAGAGATCACTGCAAACCACAGTTATGTTACTGAAGAAGGGAGGCTCAAAATTTGTCCCTACCATGATTATCTAAATTCTTCTCATGGATGCAATCTTTGTCCACCAAACATGTGCAAGGGATTGATCATAGAAAGGATTCAAAATTTACTTGATGGGGCAGGAAAGAAGAAATTTATCTACCTTGGAGATGGAAGTGGAGATTTTTGTCCAAGTTTGAAGCTCAAAGATAATGATTATTTGATGCCTAGAATCAACTTTGCCTTGTGTGATTTAGTATCTAAAAATTCTAATGGCATAAAACCTGAGGTGCATGCATGGGGAAATGGAGAAGAACTTAAGAATATTTTGCTACACATTATTAACAAAACTATTGGTGAAGAAAACAACATAATTAGACCAAAAATCTCAGTTGATTGCATGTTGGAGCAAATTTCACTTGATGCTCATAAAAATTTCCCTAAAGTCCTCTCAGTTCCTCATTAA 828 0.3587 MTSIIVVFDFDSTIIECDSDNWVLDEFGLTEKFYKLLPTMLWNPLMDKMMSELHSQGKTIEDIVQVLHRTPIHPCIVPAIEAAYSLGCELKIVSDANIFFIETILKHHGVWNCFSEITANHSYVTEEGRLKICPYHDYLNSSHGCNLCPPNMCKGLIIERIQNLLDGAGKKKFIYLGDGSGDFCPSLKLKDNDYLMPRINFALCDLVSKNSNGIKPEVHAWGNGEELKNILLHIINKTIGEENNIIRPKISVDCMLEQISLDAHKNFPKVLSVPH* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2130 275 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 187 - -
Lan6g2130 275 SUPERFAMILY HAD-like 4 185 IPR036412 -
Lan6g2130 275 Gene3D - 1 190 IPR023214 -
Lan6g2130 275 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 198 IPR006384 GO:0016791
Lan6g2130 275 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 274 IPR016965 GO:0016791
Lan6g2130 275 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Lan6g2130 275 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Lan6g2130 275 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2130 Lan-Chr6 31785921 31788114 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2130 K13248 - gmx:100789743 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2130 6 31785921 31788114 Lan3g0222 3 1437635 1439320 LSH
Lan9g0643 9 9470141 9472870 Lan6g2130 6 31785921 31788114 PCT
Lan2g0409 2 4254450 4256167 Lan6g2130 6 31785921 31788114 PCT