Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0409 ATGTCTGGAATAGTAGTGGTTTTTGATTTTGACAAGACCATTATTGATTGTGATAGTGATAATTGGGTCATTGATGAATTGGGTTTCACAGATTTGTTCAATGACCTTCTCCCCACCATGCCTTGGAACTCTCTTATGGATAAGATGATGTTGGAGCTTCATTCAAAAGGTATAACAATTGAAGACATTGAGAATGTTCTGCAAAGGATTCCTATACATCCTAGAATAATACCTGCACTTCAAGCAGCTTATGATTTAGGGTGTGATTTAAGGATTGTAAGTGATGCAAATTTGTTCTTCATTGAGGCAATTTTGAAACACTTAGGAATAAGAGAATATTTTTCAGAGATTAACACTAACCCAGGTTATGTTAATGAAGAAGGAAGGTTAAGAATTTTGCCTTACCATGACTTTAATAAAGCTCCTCATGGTTGCAGCTTGTGTCCTCCAAACATGTGCAAGGGTCTAATTATAGATAGAATCCAAGATTCAATGTCCACTAAGGATGAGAAGAGGTTCATCTATCTTGGAGATGGTGCTGGTGATTATTGCCCAAGTTTAAGGCTTAAAGAGAGAGATTTTATGATGCCAAGGAAGAACTTTCCAGTATGGGATTTGATATGTAAAGACCCTTTGCTTGTGAAGGCCGAAATTCATTGCTGGAATGATGGTGAAGAGCAAGAGCAAATTTTATTGCAGTTGATCAACAAAATTTCTATGGACAAAAATTCTCAATTCATTTCACCTGATTGCAAGCTACAGATTCTATCAATCTCTAATCCTGAGGCTTTGCCTAAAGTTCTCTCGGTTCGACCTTAA 819 0.3675 MSGIVVVFDFDKTIIDCDSDNWVIDELGFTDLFNDLLPTMPWNSLMDKMMLELHSKGITIEDIENVLQRIPIHPRIIPALQAAYDLGCDLRIVSDANLFFIEAILKHLGIREYFSEINTNPGYVNEEGRLRILPYHDFNKAPHGCSLCPPNMCKGLIIDRIQDSMSTKDEKRFIYLGDGAGDYCPSLRLKERDFMMPRKNFPVWDLICKDPLLVKAEIHCWNDGEEQEQILLQLINKISMDKNSQFISPDCKLQILSISNPEALPKVLSVRP* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0409 272 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Lan2g0409 272 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Lan2g0409 272 Gene3D - 2 188 IPR023214 -
Lan2g0409 272 SUPERFAMILY HAD-like 4 188 IPR036412 -
Lan2g0409 272 PANTHER INORGANIC PYROPHOSPHATASE 1 270 - -
Lan2g0409 272 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 199 IPR006384 GO:0016791
Lan2g0409 272 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Lan2g0409 272 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 270 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0409 Lan-Chr2 4254450 4256167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0409 K13248 - gmx:100785878 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0643 9 9470141 9472870 Lan2g0409 2 4254450 4256167 LSH
Lan2g0409 2 4254450 4256167 Lan6g2130 6 31785921 31788114 PCT
Lan2g0409 2 4254450 4256167 Lan3g0222 3 1437635 1439320 PCT