Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2057 ATGGAGGTTAATCATATTGTTGCACCTCTACCCGATTCAAAAGCACAGTCCAATAGGCGACTGAGAAAGAAGTCTATTGTCTGGGAACACTTCACCCTGAAAACTTTAAGCCCTAGATGTTCCAAGGCTTACTGCCAACAGTGTGGAAAAGAATTTGCTTATATAACAGATTCGAAACAAATTGGCACCAGCCATCTGAAGAGACACATTTCTTTGGGAATCTGTCAGAAAAATCAACCCAAAAATGGTTCATCAGGAGGTGATGATGTTGCTTCCTATCCGCCAAAGAAACGAGCAAGAGCAGCTCCTTGCGTTGCAAGTATCTCATTTGATCAGGAATTTTGCAACAATAAGATTGCTAAAATGATCATTTTACATGATTATCCCCTTCATATTGTGGAACACCAAGGCTTCATAAATTTTGTGCGGACGCTACAGCCGCAGTTTAATCCGCTAAGCTTTAATGCTGTCAAAGGGGATTGTGTTGCCATGTACCTCAGAGAAAAGCAAAATCTGTTGAATCTTATCAACGAGATTCCTGGACGAGTCAACCTCACATTGGACTTCTGGACTTCAGATCAGACATTGGCCTATGTTTTTCTACGTGGGCACTTTATTGACGGTGATTGGAACTTACATCAGCCCGTTCTCAAGGTTACGATGGTGCCATTTCCTGATTCTGACAATTCCTTGAATCAAACTATAGTGTCCTGCCTAAGTAATTGGCATTTGGAGGGTCGAATATTTACCCTTGTACTTGATAAATTCTTCTCGAATGAGACTGTGATTGGAAACTTGAGGGGTCATCTGTCTCTTAAGAACCCTGTGCTCCTCAATGGTCAATTATTAAGCAAGAACTGTTATGCTCGTGTGCTTAGTCACCTTGCATTAGATGCGCTATTGGCGATGAGAGAATCTGTCAATAAAGTTCGTGAGAGTGTGAGGTATGTGAAATCTTCAAAATATTGCGAGAAGAAGTTTTTTGAGCTTAAGCAACAGCTTCAAGTCCCTGGCATGGTTGATCTTTTAATTGATGAGCAAAATAAATGGGACACAATTTATCACATGATTGTTGCTGCTTGCAAATTAAAGGAAGTCTTTGCTTGCTTTGATGCCTTTGATCCCAATTACAAAACGACTCTGACAATGGATGAGTGGAAGCAGGTGGAAACTCTCTGCACATATTTGAAGTATTTATATGATGCGGCTAACATTTTAACTGTCCAACCATGCCCTACTGCAAACATATTTTTTCCTGCCGTGTCGAAACTTCACATGCAGTTGACAAATGCAACAATCAGCCATGATCATTTCTGTAGTAATCTGGTTACGCCTTTGCAAGTGAGGTTTGATCAATATTGGAGAGAAAACTGCCTTATCTTGGCAGTTGCTTTGGCCATGGATCCAAGGTATAAAATGAAACTTGTGGAATCCACCTTTGTTAAGATATTTGGTGAGAGTGCTGAGCTGTGGATAAAAATGGTTGAGGTTGGTCTTCATGAACTATTCGTTGAATATATCGTACAAATGCTTCCTTCATCATCAAAAAATGGTGATGAATGGAGTGAGTCTATGTTAAAGTCCGAGCTGTTAATGCTTTCTTCATCAGCAACAAATAGCGATGAAGGGAATGAGGCTATGATAAAGACTGAGCCGTTGATGCTTTCTTCAACAGCAATAAATGGCAACGATGAAGGGAATGAGGCTATTATAAAGAATGAGTCATTGATGCTTTCTTCAACAGCAACAAATGATGAAGAGAATGTGATAAAGATTGAGGCATGTCAAGAAGGGTCACTTGATTGTTTTCTTTTTGATGCTGAAAATGAACTTTCTGATATTGAATTATACTTATCTGATGTTACAGGTAACTATCAATTTAATTCAGAATTGAATGAGTATTTGGAAGAATCTTTGGCACCAAATGTACAAGAATTTGATATTCTGAGTTGGTGGAGAATAAATGGATTGAAGTACCCCACTTTATCTAGAATGGCATCTGATATTTTGTCTATACCAGTGTCCACTGTCTCTGCAGATTCTGTTTTTGACACCGAAACTAGGAAAATGGATAGTTATAGAACTTCATTAGACCCCATGACTCTTGAGGCTCTTATTTGTACTAAGGATTGGTTCCAGCATGAATCACTACCTAATGACTTTGCAAATGGATCTTGTCATTCTAGGGATAGATTCTCAAGTAGTAGCTTTTAG 2214 0.3907 MEVNHIVAPLPDSKAQSNRRLRKKSIVWEHFTLKTLSPRCSKAYCQQCGKEFAYITDSKQIGTSHLKRHISLGICQKNQPKNGSSGGDDVASYPPKKRARAAPCVASISFDQEFCNNKIAKMIILHDYPLHIVEHQGFINFVRTLQPQFNPLSFNAVKGDCVAMYLREKQNLLNLINEIPGRVNLTLDFWTSDQTLAYVFLRGHFIDGDWNLHQPVLKVTMVPFPDSDNSLNQTIVSCLSNWHLEGRIFTLVLDKFFSNETVIGNLRGHLSLKNPVLLNGQLLSKNCYARVLSHLALDALLAMRESVNKVRESVRYVKSSKYCEKKFFELKQQLQVPGMVDLLIDEQNKWDTIYHMIVAACKLKEVFACFDAFDPNYKTTLTMDEWKQVETLCTYLKYLYDAANILTVQPCPTANIFFPAVSKLHMQLTNATISHDHFCSNLVTPLQVRFDQYWRENCLILAVALAMDPRYKMKLVESTFVKIFGESAELWIKMVEVGLHELFVEYIVQMLPSSSKNGDEWSESMLKSELLMLSSSATNSDEGNEAMIKTEPLMLSSTAINGNDEGNEAIIKNESLMLSSTATNDEENVIKIEACQEGSLDCFLFDAENELSDIELYLSDVTGNYQFNSELNEYLEESLAPNVQEFDILSWWRINGLKYPTLSRMASDILSIPVSTVSADSVFDTETRKMDSYRTSLDPMTLEALICTKDWFQHESLPNDFANGSCHSRDRFSSSSF* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2057 737 SMART bed5 22 78 - -
Lan6g2057 737 SUPERFAMILY beta-beta-alpha zinc fingers 25 71 IPR036236 -
Lan6g2057 737 Pfam hAT family C-terminal dimerisation region 630 712 IPR008906 GO:0046983
Lan6g2057 737 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 10 718 - -
Lan6g2057 737 PANTHER BED FINGER-RELATED 10 718 IPR045259 -
Lan6g2057 737 Pfam Domain of unknown function (DUF4413) 410 506 IPR025525 GO:0003677
Lan6g2057 737 SUPERFAMILY Ribonuclease H-like 177 713 IPR012337 -
Lan6g2057 737 ProSiteProfiles Zinc finger BED-type profile. 22 82 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2057 Lan-Chr6 31245125 31248561 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2057 - - lang:109351164 1452.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2057 6 31245125 31248561 Lan3g0134 3 920838 924028 LSH
Lan6g2057 6 31245125 31248561 Lan5g0535 5 10822145 10825406 PCT
Lan5g0535 5 10822145 10825406 Lan6g2057 6 31245125 31248561 PCT