Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1964 ATGTCGGGATTACTTAATTCTTCTCTGAACGGATCTGCTTCAAATCTTCCAGACGGTGCTGCACGGTCTTTTGCTACATCATTCTCCGGTCAGTCTGGTGCAGCTTCCCCAGTTTTTCATCACACTGGATCTATTCAGGGGTTGCATAACATTCATGGGAGCTTTAACGTTCCAAACATGCCTGGTACACTCTCATCAAGAAACTCAACGATAAACAGTGTTCCAACTGGTGGGGCTCAACAACCTACAGCGAGCCTTTCTAGTGGAAGGTTTGCATCAAATAATATACCCGTTGCTCTTTCACAGCTATCTCATGGAAGCTCTCATGGACATTCAGGAGTCAACAATAGAGGGGGTATAAGTGTTGTAGGAAATCCTGGATTTAGTAGTAGCTCAAATGGAGTTGGCGGTTCTATTCCTGGGATTCTTCCAACTTCTGCCACAATGGGTAACCGAAACACTGTTCCAGGATTGGGGGTATCCCCGATTTTGGGAAACACAGGTCCTCGAATTACAAGTTCTATGGGAAACATGGTGGGCGGGGGGAACATTGGGAGGATAGGCTCTGGTGGAGGATTGTCTGTACCTGGTCTTGGTCGACTAAATTTAAGTGGAAATGGTGGATCTGGAGGTTTAGGTGCGCAAGGACAAAATCGACTGATGGGTGGTATGCTTCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAGCTCTTATCCTGGTGCCGGTGGTCCTCTTTCACAAAGCCATGTTCAAGCAGTAAATAACTTGAACTCAATGGGGATGTTGAATGATGTGAATTCAAGTGACAATTCACCTTTTGACATCAATGACTTTCCTCAATTGACAAGCCGTCCTAGTTCTTCTGGAGGACCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGTGTTAGCCCAATTGTCCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATGCAGATTTTGGCATGGATGTGCACCAGAAAGAACAACTTCATGACAATGCTGTATCTATGATGCAATCTCAACATTTCTCAATGGGGAGGTCTGCTGGTTTCAGTTTGGGGGGATCATATTCATCACACCGTACACAACAGCAGCAGCAGCATGGTCCTTCAGTAAGTAGCGGTGGTGTTTCCTTTTCATCTATAAACAATCAAGATCTTCTCCATCTGCATGGCTCAGATGTATTTCCATCATCACACTCAACTTATCATTCCCAATCACAGACCAGTGGACCTCCTGGCATTGGATTAAGGCCTCTAAATTCTCCAAACACAGTTTCTGGTATGAATTCATATGACCAACTCATCCATCAATATCAACATCAGAACCAATCCCAGCTCCGCAACCTTCACCAGATGTCAGCTGTAAATCAGTCTTTTAGGGATCAGGGCCTGAAGTCTATGCAAACTGCACAATCTGCTCCAGACCCATTTGGTTTGCTTGGCTTGTTAAGTGTTATCAGGATGAGTGATCCTGACCTGACATCTCTTGCTCTTGGAATTGACCTTACAACACTTGGGTTAAATTTGAATTCATCAGAAAATTTGCACAAGACTTTTGGGTCTCCATGGTCTGATGAACCGGCTAAGGGTGATCCAGAGTTCAGTGTGCCACAATGTTATTATGCTAAACAACCTCCTGCTCTACATCAAGGTTACTTTTCAAAGTTTTCGGTGGAAACGTTGTTTTACATATTTTACAGTATGCCCAAAGATGAGGCACAGCTATATGCAGCCAATGAACTTTACAAACGAGGGTGGTTTTATCACAAAGAGCATCGCTTGTGGTTTATAAGAGTTCCCAACATGGAGCCGCTTGTCAAAACTAACACATATGAGAGAGGGTCTTACCACTGTTTTGATCCAAGCACTTTCGAAACTGTCCGGAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAGAAGAGACCGGCATTGCCCCAACATTGA 2001 0.4383 MSGLLNSSLNGSASNLPDGAARSFATSFSGQSGAASPVFHHTGSIQGLHNIHGSFNVPNMPGTLSSRNSTINSVPTGGAQQPTASLSSGRFASNNIPVALSQLSHGSSHGHSGVNNRGGISVVGNPGFSSSSNGVGGSIPGILPTSATMGNRNTVPGLGVSPILGNTGPRITSSMGNMVGGGNIGRIGSGGGLSVPGLGRLNLSGNGGSGGLGAQGQNRLMGGMLPQGSPQVISMLGSSYPGAGGPLSQSHVQAVNNLNSMGMLNDVNSSDNSPFDINDFPQLTSRPSSSGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADFGMDVHQKEQLHDNAVSMMQSQHFSMGRSAGFSLGGSYSSHRTQQQQQHGPSVSSGGVSFSSINNQDLLHLHGSDVFPSSHSTYHSQSQTSGPPGIGLRPLNSPNTVSGMNSYDQLIHQYQHQNQSQLRNLHQMSAVNQSFRDQGLKSMQTAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFSVPQCYYAKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRLWFIRVPNMEPLVKTNTYERGSYHCFDPSTFETVRKDNFVLHYEMLEKRPALPQH* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1964 666 Pfam NOT2 / NOT3 / NOT5 family 535 657 IPR007282 GO:0006355
Lan6g1964 666 PANTHER CCR4 NOT-RELATED 2 666 IPR040168 GO:0030015
Lan6g1964 666 MobiDBLite consensus disorder prediction 263 301 - -
Lan6g1964 666 Gene3D - 485 666 IPR038635 -
Lan6g1964 666 MobiDBLite consensus disorder prediction 366 395 - -
Lan6g1964 666 MobiDBLite consensus disorder prediction 415 446 - -
Lan6g1964 666 MobiDBLite consensus disorder prediction 263 297 - -
Lan6g1964 666 MobiDBLite consensus disorder prediction 59 86 - -
Lan6g1964 666 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1964 Lan-Chr6 30571270 30578344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1964 K12605 - gmx:100807026 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1964 6 30571270 30578344 Lan10g0109 10 629650 635879 LSH
Lan6g1964 6 30571270 30578344 Lan7g0266 7 1703383 1710275 PCT
Lan7g0266 7 1703383 1710275 Lan6g1964 6 30571270 30578344 PCT