Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1937 ATGTCATCAGAATCTCACTCCGATCAATTCCACCTTCCTACACTAACATCAAGCCTCTTCGATCCCGAAGAAGATTCTTCCATTCACGATCCAAACGGCGTCGTTCATGGATCTTCTTCTGCTCATTCTCAACCCTCCGATGATGTCTCAATCCGTGCGCACACCGCTTCATCTCAACCCTCCACTCCAAGTAGTAGCGGTTATGTTGCTGAAATTGAAGATGTTGCTCTTCAGAATGAAATTCAGGAGTTAAGTATCCATGGCAGTGATGAGGATGATGCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTTTTTGTTCTCAGTCATTCTGGCAAACCAATATATTCTAGGTATGGAGATGAACACAAGCTTGCTGGGTTTTCAGCAACTTTGCAAGCAATTATTTCCTTTGTGGAGAATGGGGGTGATCGTGTCAAATTGGTGAGAGCTGGGAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTCTGCATCAGCTGCACAGAAGAACCTTATGAGTCATTAGTGGAGCAGTTGGAGCTTATTTATGGCCAGATGATTGTTATACTAACAAAGGCAGTGAACAAATGTTTTGAGAAGAATCCCAAGTTTGATATGACACCCTTGCTTGGTGGAACAGATATTGTCTTCTCTTCACTAATCCACTCTTTTAGTTGGAATCCAGCTACATTTCTTCATGCCTACACTTGTCTTCCTCTTGCATATGCAACAAGGCAAGCTGCTGATGCTATCTTGCAAGATGTTGCTGATTCAGGTGTTCTGTTTGCAATACTGATGTGCAGGCACAAGGTAATCAGTCTAGTTGGTGCTCAGAAAGCGACTCTTCATCCAGATGATATGCTGCTGCTGGCCAACTTTGTCATGTCATCAGAATCTTTTAGGACATCAGAATCATTTTCTCCGGTTTGCTTGCCAAGATACAATTCTTTGGCATTTATGTATGCTTATATCCATTATTTTGATGCTGACACATACTTAATGTTGCTGACCACTAGTTCAGATGCATTTTACCATCTGAAGGATTGCAGGATTCATATTGAAATGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAAAGATCCTTGCTTGACGGTGGAATGCGTGTTGAGGATCTGCCACCCCTACCTCGTTTTGGATCATCTCAATTGGGCCAGAACAGGCTTCAATTGGATTCTCCTGACCGATTGAGAGAACCTAATTCTGGCATTGGTGGTGATGCTGGGTTGTGGCATTTCTTATATCGCAGTATATATCTGGATCAATATGTATCTTCAGAGTTCTCATCACCGATTAACACTCCTCAGCAGCAGAAAAGGCTGTATAGAGCTTACCAGAAATTTTTCGTGTCAATGCATGATAAAGGAATTGGGCCACACAAAACTCAGTTTAGAAGGGATGAAAACTATGTTCTTCTTTGTTGGGTGACACAGGATTTTGAGCTATATGCTGCATTCGATCCCCTTGCTGACAAGGCCTCGGCAATAAAAACTTGCAACCGAGTGTGTCAATGGGTGAAAGATGTGGAAAATGAAATATTCTTGATAGGAGCTACCCCTTATTCATGGTGA 1605 0.4206 MSSESHSDQFHLPTLTSSLFDPEEDSSIHDPNGVVHGSSSAHSQPSDDVSIRAHTASSQPSTPSSSGYVAEIEDVALQNEIQELSIHGSDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLVEQLELIYGQMIVILTKAVNKCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAADAILQDVADSGVLFAILMCRHKVISLVGAQKATLHPDDMLLLANFVMSSESFRTSESFSPVCLPRYNSLAFMYAYIHYFDADTYLMLLTTSSDAFYHLKDCRIHIEMVLLKSNVLSEVQRSLLDGGMRVEDLPPLPRFGSSQLGQNRLQLDSPDRLREPNSGIGGDAGLWHFLYRSIYLDQYVSSEFSSPINTPQQQKRLYRAYQKFFVSMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKASAIKTCNRVCQWVKDVENEIFLIGATPYSW* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1937 534 MobiDBLite consensus disorder prediction 1 67 - -
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 103 120 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 121 141 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 155 169 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 206 218 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 235 256 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 259 272 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 283 299 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 308 331 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 336 362 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 483 497 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 499 512 IPR004353 GO:0006623
Lan6g1937 534 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 512 532 IPR004353 GO:0006623
Lan6g1937 534 Pfam Second Longin domain of FUZ, MON1 and HPS1 264 354 IPR043971 GO:0016192
Lan6g1937 534 PANTHER SAND PROTEIN-RELATED 64 534 IPR004353 GO:0006623
Lan6g1937 534 MobiDBLite consensus disorder prediction 1 22 - -
Lan6g1937 534 PANTHER BNAC04G15860D PROTEIN 64 534 - -
Lan6g1937 534 Pfam First Longin domain of FUZ, MON1 and HPS1 103 223 IPR043972 GO:0016192
Lan6g1937 534 MobiDBLite consensus disorder prediction 32 67 - -
Lan6g1937 534 Pfam Third Longin domain of FUZ, MON1 and HPS1 420 520 IPR043970 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1937 Lan-Chr6 30352744 30357636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1937 K20195 - gmx:100816794 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1937 6 30352744 30357636 Lan3g0082 3 551433 556201 LSH
Lan6g1937 6 30352744 30357636 Lan8g1666 8 23632451 23637112 PCT
Lan8g1666 8 23632451 23637112 Lan6g1937 6 30352744 30357636 PCT