Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0082 ATGTCATCTGAATCTCACTCCGATCTTCCCGTTCATCTCCACTTTCCGCCACTCACATCAAGCCTCTTCGACGCCGAAGAAGATTCTCCGAATCAAGAACCAAACGGCGTCGTTCACGGATCTTCTTCTCTTCCTCAACCTCAATCACTCGATGAGGTTTCAATTCGAGCCCTCATACCTTCATCTGAACCCTCAAGCCCTAGTAGTAGCGGTTATGCCGGCGAAAGAGGTAGCGTTAGCACCACCGCTACTAGCATTGTCTCCGAAATTCATGAGATCGTAGTTCAGCATGAAATTGAAGAGTTGACTATCGATGATGATCAATATCATGATGCTGTGTCTAATTGCAACGACCACGTACCTACCGGGAAACTACGTAGCGATGATGAGGATGATTCTTCCATGTCATGGAGGAAAAGGAAGAAGCATTTTTTTGTTCTGAGTCATTCTGGCAAACCAATATATTCTAGGTATGGAGATGAACACAAGCTTGCTGGATTTTCAGCGACTTTGCAAGCAATCATTTCCTTTGTGGAGAACGGAGGTGATCGTGTCAAATTGGTGAGGGCTGGGAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTCTGCATCAGCTGCACAGAAGAGCCTTATGAGTCATTAAGGGGGCAGTTGGAGCTTATTTATGACCAGATGATTGTTATACTGACAAAGTCAGTAAACAAATGTTTTGAGAGGAATCCGAAGTTTGATATGACACCCTTGCTTGGTGGAACAGATATTGTCTTCTCTTCACTAATCCAATCTTTTAGTTGGAATCCAGCTACATTTCTTCACGCATACACCTGTCTTCCTCTTGCATATGCAACAAGGCAGGCTGCTGGTGCTATCTTGCAAGATGTTGCTGATTCAGGTGTTCTGTTTGCAATACTGATGTGCAGGCACAAGGTAATCAGTCTAGTTAGTGCTCAGAAAGCTACTCTTCATCCAGATGATATGCTGCTGCTGGCCAACTTTGTTATGTCATCAGAATCTCTTAGGACATCAGAATCATTTTCTCCTGTTTGCTTGCCAAGATACAACTCTTTGGCATTTATGTATGCTTATATCCATTTTTTTGATGCTGACACTTACTTGATGTTGCTGACCACTAGTTCAGATGCATTTTACCATCTTAAGGATTGCAGGATTCGTATAGAAATGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGCTCAGAGATCCTTGCTAGATGGTGGAATGCGTGTTGAGGATCTGCCACCCCTACCTCATTCTGGATCATCTTCTCATTTGGGCCAAAACAGGCTTCCATTGGATTCTCCTGACAGATTGAGAGAACCTAATTCTGGCATTGGTGGTGCTGCTGGGTTGTGGCATTTCATATATCGTAGTATATATCTGGATCAATATGTATCTTCAGAGTTCTCATCACCAATTAACACTCCTCAGCAGCAAAAAAGGCTCTACAGAGCTTACCAGAAACTTTTTGTGTCAATGCATGATAAAGGAACTGGGCCACACAAAACTCAGTTTAGAAGGGATGAAAACTACGCTCTTCTTTGTTGGGTGACCCAAGATTTTGAACTCTATGCTGCATTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAAACTTGCAACCGAGTGTGTGAATGGGTAAAAGATGTGGAAAGTGGAATATTTTTTCTCGGAACTAGCCCCTTTTCATGGTGA 1725 0.4296 MSSESHSDLPVHLHFPPLTSSLFDAEEDSPNQEPNGVVHGSSSLPQPQSLDEVSIRALIPSSEPSSPSSSGYAGERGSVSTTATSIVSEIHEIVVQHEIEELTIDDDQYHDAVSNCNDHVPTGKLRSDDEDDSSMSWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLELIYDQMIVILTKSVNKCFERNPKFDMTPLLGGTDIVFSSLIQSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMCRHKVISLVSAQKATLHPDDMLLLANFVMSSESLRTSESFSPVCLPRYNSLAFMYAYIHFFDADTYLMLLTTSSDAFYHLKDCRIRIEMVLLKSNVLSEAQRSLLDGGMRVEDLPPLPHSGSSSHLGQNRLPLDSPDRLREPNSGIGGAAGLWHFIYRSIYLDQYVSSEFSSPINTPQQQKRLYRAYQKLFVSMHDKGTGPHKTQFRRDENYALLCWVTQDFELYAAFDPLADKALAIKTCNRVCEWVKDVESGIFFLGTSPFSW* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0082 574 MobiDBLite consensus disorder prediction 24 50 - -
Lan3g0082 574 MobiDBLite consensus disorder prediction 425 448 - -
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 142 159 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 160 180 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 194 208 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 245 257 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 274 295 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 298 311 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 322 338 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 347 370 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 375 401 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 523 537 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 539 552 IPR004353 GO:0006623
Lan3g0082 574 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 552 572 IPR004353 GO:0006623
Lan3g0082 574 MobiDBLite consensus disorder prediction 1 52 - -
Lan3g0082 574 Pfam Third Longin domain of FUZ, MON1 and HPS1 460 560 IPR043970 GO:0016192
Lan3g0082 574 PANTHER SAND PROTEIN-RELATED 57 574 IPR004353 GO:0006623
Lan3g0082 574 PANTHER BNAC04G15860D PROTEIN 57 574 - -
Lan3g0082 574 Pfam Second Longin domain of FUZ, MON1 and HPS1 303 394 IPR043971 GO:0016192
Lan3g0082 574 Pfam First Longin domain of FUZ, MON1 and HPS1 142 262 IPR043972 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0082 Lan-Chr3 551433 556201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0082 K20195 - gmx:100816794 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1937 6 30352744 30357636 Lan3g0082 3 551433 556201 LSH
Lan3g0082 3 551433 556201 Lan8g1666 8 23632451 23637112 PCT
Lan8g1666 8 23632451 23637112 Lan3g0082 3 551433 556201 PCT