Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1921 ATGGCTCATCTCTTCACTCTTCTTACATTCTCACTCATAATTTGTTCTACTACTAGTGCCAAGGGTCCACCTTCACCTGGCTACTACCCTAGTTCCAATGTTAGTCCTGTTAGCTTTGGTCAAGGATTTAGTAACCTATGGGGACCTCAGCATCAGAAACTTGACCAGGGCTCATTAACAATCTGGCTTGATTCAAACTCAGGGAGTGGATTCAAGTCACTTCACTCTTATCAATCTGGATACTTTGGTGCTGCAATTAAGCTTCAACAAGGTTATACTGCAGGAGTCATTACATGTCTCTACCTTTCAAACAACCAAGTCTACCCAGGAAACCATGACGAAATTGACATTGAGTTCCTTGGTACCACACCAAATAAGCCATATATATTGCAGACAAATGTGTTCATCAGAGGAAGTGGAGATAGAAACATAGGAAGAGAGATGCAGTTTCACCTTTGGTTTGACCCTACACAAGATTTTCACAACTATGCTATTCTGTGGAAACCCAATGAGATCATATTTTTAGTGGATGATGTCCCAGTGAGGAGTTATCCTAGGAAGAGTGATGCAACATTCCCTTCAAGACCAATGTATGTGTACGGATCAATATGGGATGCATCTTCATGGGCCACAGAAGATGGAAAATACAAAGCTGATTATAAATACCAACCCTTCATTGGTAAATATACAAACTTCAAACTTCAAGGTTGCACCAATGAAACCTCCACCACATGCAAACCACCCTCCGCCTCGCCATCCGGCGGCAACGGCAGCCTTAGCCCTCAACAGCTTGGGTCAATGCAATGGGTCCAAAACAACTACTTGGTCTATAACTATTGTCATGATCCTAGGAGAGACCATACACTAACCCCTGAATGCTAA 882 0.4263 MAHLFTLLTFSLIICSTTSAKGPPSPGYYPSSNVSPVSFGQGFSNLWGPQHQKLDQGSLTIWLDSNSGSGFKSLHSYQSGYFGAAIKLQQGYTAGVITCLYLSNNQVYPGNHDEIDIEFLGTTPNKPYILQTNVFIRGSGDRNIGREMQFHLWFDPTQDFHNYAILWKPNEIIFLVDDVPVRSYPRKSDATFPSRPMYVYGSIWDASSWATEDGKYKADYKYQPFIGKYTNFKLQGCTNETSTTCKPPSASPSGGNGSLSPQQLGSMQWVQNNYLVYNYCHDPRRDHTLTPEC* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1921 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 5 293 - -
Lan6g1921 293 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 18 229 IPR000757 GO:0004553|GO:0005975
Lan6g1921 293 Gene3D - 19 293 - -
Lan6g1921 293 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 293 IPR013320 -
Lan6g1921 293 PIRSF EndGlu_transf 2 293 IPR016455 GO:0010411|GO:0016762|GO:0042546
Lan6g1921 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 5 293 IPR044791 GO:0004553
Lan6g1921 293 MobiDBLite consensus disorder prediction 243 262 - -
Lan6g1921 293 Pfam Glycosyl hydrolases family 16 41 221 IPR000757 GO:0004553|GO:0005975
Lan6g1921 293 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 257 293 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1921 Lan-Chr6 30159043 30161618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1921 1 293 Glycoside Hydrolase AT3G44990 64.626 2.49e-139 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1921 K08235 - gmx:100776165 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1921 6 30159043 30161618 Lan13g0402 13 2757271 2760800 PCT
Lan13g0402 13 2757271 2760800 Lan6g1921 6 30159043 30161618 PCT