Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1842 ATGTCCAAGATCATATCACTAATGGCGACCCTTTCCTCCTTCTTCACACTTCTATTTACACTTCTCACCTTTTCAGATTTGTGTGTGCAAACACAAGGCCTTAATTTCGGGATCAACTATGGACAAATCGCGAACAATCTTCCTTCTCCATCACGCGTGGCGCTTCTAATAAAATCACTTAATGTAAGCAGAATTAAACTGTATGATGCTGATCCAAATGTTCTATCTGCCTTCTCCAATTCAAATGTAGAATTCATTGTAGGAGTTGGAAATGAGTATCTACAAAGCATGAGAGACCCTTCTAAGGCACAAACATGGATTCAACAAAATGTTCAACCTTACCTTTCAAATACCAAAATCACTTGCATCACTGTAGGAAATGAAGTCTTCAATAGCACTGCCACTGATACTCAACTCATGTCAAATCTTCTCCCAGCAATGCAAAATGTGTACAATGCCCTTGTTAATCTTGGACTATCACAACAAGTTACTGTCACAACAGCACATTCTTTCAACATCTTATCAAATTCATTCCCTCCTTCATCTGGAGTCTTTAGTCAAAGTCTAATACAATATATCCAACCCCTTCTAACTTTTCATTCTCAAACCAAATCACCCTTTCTCATTAATGCATATCCTTTCTTTGCATACAAAGACAACCCTGATCAAATTTCCTTAAGCTATGTACTATTCCAACCAAACCAAGGCACAATTGATCCAAACACAAATTTACATTATGATAACATGTTGTATGCTCAAATTGATGCTGTCTATGCTGCTATCAAGGCACTTGGACACACTGATATTGAAGTAAGAATTTCTGAGACAGGTTGGCCTTCAAAGGGTGACCCTGATGAAATTGGAGCCACACTTGAGAATGCTGAAATATATAATAGCAATTTGTTGAAGAGGATAGAGCAGAAACAAACAACTCCTGGAAATCCTAGTGTTCCAATTGATATATATGTGTTTGCACTTTTTAATGAAGATATGAAACCTGGTCCTGCATCAGAAAGAAACTATGGCCTATATTATCCTGATGGTACCCCAGTTTATAACATTGGATTACAAGGTTATCTTCCAGAAATGGTTATACAATCCAAATCCAATACTTTGTCCATCCATTTTTTCATCTACATAGTTACATGCTTAGCGTTTGCTTGGGAACTTTCGAGATTGTGA 1182 0.3723 MSKIISLMATLSSFFTLLFTLLTFSDLCVQTQGLNFGINYGQIANNLPSPSRVALLIKSLNVSRIKLYDADPNVLSAFSNSNVEFIVGVGNEYLQSMRDPSKAQTWIQQNVQPYLSNTKITCITVGNEVFNSTATDTQLMSNLLPAMQNVYNALVNLGLSQQVTVTTAHSFNILSNSFPPSSGVFSQSLIQYIQPLLTFHSQTKSPFLINAYPFFAYKDNPDQISLSYVLFQPNQGTIDPNTNLHYDNMLYAQIDAVYAAIKALGHTDIEVRISETGWPSKGDPDEIGATLENAEIYNSNLLKRIEQKQTTPGNPSVPIDIYVFALFNEDMKPGPASERNYGLYYPDGTPVYNIGLQGYLPEMVIQSKSNTLSIHFFIYIVTCLAFAWELSRL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1842 393 Pfam Glycosyl hydrolases family 17 37 354 IPR000490 GO:0004553|GO:0005975
Lan6g1842 393 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 373 IPR044965 GO:0004553|GO:0005975
Lan6g1842 393 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 19 373 - -
Lan6g1842 393 SUPERFAMILY (Trans)glycosidases 36 354 IPR017853 -
Lan6g1842 393 Gene3D Glycosidases 35 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1842 Lan-Chr6 29646009 29648404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1842 86 388 Glycoside Hydrolase AT2G27500 65.789 1.65e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1842 - - gmx:100786020 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1842 6 29646009 29648404 Lan5g0541 5 10878167 10880851 PCT
Lan5g0541 5 10878167 10880851 Lan6g1842 6 29646009 29648404 PCT