Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0541 ATGTTCACATTAAAGATCATGATGATGTTCTCTTCCTCTACTTCTTTCTTTCTCTGGATTTTTCTCTTCTTCTCTTTAACTCATGTTTTAGGGGATAAATTTTTCACAGGAACATATGGAGTAAACTATGGTAGGATTGCAGATAATCTTCCTTCTCCTCACAGTGTTGTTACACTTCTCAAAGCATCAAAGATTAGAAACATTAGAATATATGATGTTAATCAAGAAGTACTCACTGCATTCAAAGGCTCTGGAATCCAAATTTCAGTGTGTCTACCCAATGAACTTCTTAAAGAAATGAGTGTAGCCGAAGATCGCGCTATGACATGGATCAAAGAAAATGTGCAGCCCTATATTCCAGGAACAAAGATTCGCGGAATCGCGATCGGAAATGAAATCTTAGGAGGAGGAGATGTGGAGCTTTGGGAAGCATTGTTGCCTGCAGCTAAAAATATTTATAGTGCACTTAATAGGCTTGGTTTAGCCCATGAAATTCAAGTAACTAGTCCTCATTCAGAAGCTGTTTTTGCTAATTCATACCCTCCATCAGCATGCACTTTTAGGGATGATATACTTCCATATATGAAGCCATTATTGCAATTTTTCTCACAAAATGGAACCCCTTTTTTCATTAATGCATACCCTTTTTTGGCCTATAAAAATGACCCCCAACACATTGATATAAACTATGCACTTTTCAAGAAAAACCATGGAATTTATGATGCTAAGACTAAGCTACATTATGATAACATGTTTGATGCTCAAGTTGATGCAGCTTATGCTGCATTAGAGAAAGTTGGGTATGATAAAATGGAAGTGATTGTTTCAGAAACTGGTTGGGCTTCACATGGTGATGATAATGAAGCTGGTGCAACAGTGAAAAATGCAAAAACTTATAATAAAAATTTGAGGAAAAAGTTACTTAAGAGAAAGGGTACCCCTTATAGGCCAAAGAAAGTGGTTAAGGCTTATATATTTGCTTTGTTTAATGAGAATTTGAAGCCTGGACCAACATCTGAGAGAAACTTTGGATTATTCAAACCTGATGGAAGCATTGCATATGATATTGGCTTCACTGGACTTGTTGATTCATCTGCAACTTCATCTATTCTTAACTTCAAGGGTATTGGATCTTCATACATGATGGTTTTTACAACTTGTGCTGCTCTTCTTCTTGCAACATTGTAA 1188 0.362 MFTLKIMMMFSSSTSFFLWIFLFFSLTHVLGDKFFTGTYGVNYGRIADNLPSPHSVVTLLKASKIRNIRIYDVNQEVLTAFKGSGIQISVCLPNELLKEMSVAEDRAMTWIKENVQPYIPGTKIRGIAIGNEILGGGDVELWEALLPAAKNIYSALNRLGLAHEIQVTSPHSEAVFANSYPPSACTFRDDILPYMKPLLQFFSQNGTPFFINAYPFLAYKNDPQHIDINYALFKKNHGIYDAKTKLHYDNMFDAQVDAAYAALEKVGYDKMEVIVSETGWASHGDDNEAGATVKNAKTYNKNLRKKLLKRKGTPYRPKKVVKAYIFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLVDSSATSSILNFKGIGSSYMMVFTTCAALLLATL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0541 395 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 17 389 - -
Lan5g0541 395 Pfam Glycosyl hydrolases family 17 40 358 IPR000490 GO:0004553|GO:0005975
Lan5g0541 395 Gene3D Glycosidases 38 363 - -
Lan5g0541 395 SUPERFAMILY (Trans)glycosidases 39 357 IPR017853 -
Lan5g0541 395 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 389 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0541 Lan-Chr5 10878167 10880851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0541 35 367 Glycoside Hydrolase AT3G15800 75.749 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0541 - - gmx:100789056 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1842 6 29646009 29648404 Lan5g0541 5 10878167 10880851 PCT
Lan5g0541 5 10878167 10880851 Lan6g1842 6 29646009 29648404 PCT