Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1765 ATGGCCACTACTCTCTCTGAAGCCTATAGAAACCACCCTCTAAACCTTCATCATATAATTCCCTTAGATTTTTCTTCAATTAGGACCTTACCAGATTCCCATGCTTGGTCTCAATCTAATGATAGTGATAATAATTTTTCATATAATGAATCATTATCCATACCCATTATTGACCTTATAGATCCTCATGCAATGGAACAAATAGGCTTCGCATGTGAGAAATGGGGTGTTTTTCAATTGAAGAACCATGGCATACCCTTGAGTGTTATTGAAGAAGTTGAAGTAGAATCAAAGAAACTATTCTCTCTCCCGGCTGAGGAGAAGTTGAAAGCACTTCGATCTCCCGGCGGCGCCACCGGGTACGGCAGAGCTAGGATATCACCATTTTTTCCTAAGTTTATGTGGCATGAAGGATTCACCTTCATGGGTTCTTCTGATGATGCCAAAAAGATCTGGCCAAAGGACTATGAACGGTTTTGTGATGCAATGGAGAATTACCAAAACCAAATGAAGGTCCTATCAGAAAAACTAACACACATGATATTGACCTTTTTAGGCATCAATAATTCATCACAAGAAAACAAATGGGTTGGTTCAACAAATCACATTGGAGCTATTCAACTAAATTTCTACCCATGTTGTCCTGAACCAAATAGAGCCATGGGTCTAGCCCCACACACTGACACATCCTTTCTCACAATCCTTCACCAAACCCTAACCAATGGACTCCAAATATTCAAAGATGGTTCAGGTTGGGTCCCTATAAACCCTAACCCTAACACACTTGTTGTTAACATTGGTGACATTCTTCATATAATGTCTAATGCTAGGTTTCATTGTGCACTTCATAGAGTTGTTGTGAACAAAACAAAACAAAGATACTCTATGGCTTATTTTTATGGACCCCCAATTGATTATGTTATTTCTCCTATAGTTATAAATTGTGTTGTTCCACGTTTTCATGCTTTGACTGTGAAGGAGTATATTAGCATTAAAGCCAAAAATCTTGGGGGAGCATTGTCTTTGATTACCACTACTTGA 1041 0.3862 MATTLSEAYRNHPLNLHHIIPLDFSSIRTLPDSHAWSQSNDSDNNFSYNESLSIPIIDLIDPHAMEQIGFACEKWGVFQLKNHGIPLSVIEEVEVESKKLFSLPAEEKLKALRSPGGATGYGRARISPFFPKFMWHEGFTFMGSSDDAKKIWPKDYERFCDAMENYQNQMKVLSEKLTHMILTFLGINNSSQENKWVGSTNHIGAIQLNFYPCCPEPNRAMGLAPHTDTSFLTILHQTLTNGLQIFKDGSGWVPINPNPNTLVVNIGDILHIMSNARFHCALHRVVVNKTKQRYSMAYFYGPPIDYVISPIVINCVVPRFHALTVKEYISIKAKNLGGALSLITTT* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1765 346 Pfam 2OG-Fe(II) oxygenase superfamily 206 302 IPR044861 -
Lan6g1765 346 Coils Coil 156 176 - -
Lan6g1765 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 199 302 IPR005123 -
Lan6g1765 346 SUPERFAMILY Clavaminate synthase-like 17 335 - -
Lan6g1765 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 153 IPR026992 -
Lan6g1765 346 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 339 - -
Lan6g1765 346 Gene3D - 17 336 IPR027443 -
Lan6g1765 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1765 Lan-Chr6 28884208 28887169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1765 52 328 Glycosyltransferase AT5G59530 29.431 4.92e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1765 K04124 - gmx:100808546 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0975 10 14778737 14781581 Lan6g1765 6 28884208 28887169 LSH