Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0975 ATGTCTAATACTTTCTCTGAAGCCTTTAGAAACCACCCTCTTCCCCTAAATGATATAATCCCCTTAGATTTTTCTTCAATTAGGACCTTACCTGAGTCCCATGCTTGGTCTAAATCAAATGATAATGGTGATCATTTTTCATTCAATGAATCATTATCCATACCCATTATTGACCTTATGGATCCTAATGCTATGGAACAAATAGGCCATGCATGTGAGAAATGGGGTGCATTTCAATTGAAGAACCATGGCATACCCTTGAGTGTTATTGAAGATGTTGAAGTAGAGTCAAAGCATCTCTTTTCTCTTCCGGCTGAGAAGAAGTTGAAAGCCCTAAGATCTTCCGGCGGCGCCACCGGGTACGGCAGAGCTAGGATATCACCATTTTTTCCCAAGTACATGTGGCATGAAGGATTTACTTTCATGGGTTCTTCTGATGATGCTAAAAAGATCTGGCCAAAGGACCATGCACCGTTTTGTGATACAATGCAGAATTACCAAAACCAAATGAAGGTCCTAGCAGAAAAACTAACACACATGATATTAAACTTTATGGGCATGAATTCAGAAGAAGAAAAGAAATGGGTTGGTTCAAAAAACCAATTTGAAGCTATTCAACTAAATTACTACCCATGTTGTCCTGAACCAGATAGAGCCATGGGTTTAGCCCCACACACAGACACATCCTTTCTCACAATCCTTCACCAAACACAAACCAATGGCCTTCAAATCTTCCAAAAATGTTTAGGGTGGGTCCCTATAAACCCTGACCCTAACACACTTGTTGTTAACATTGGTGATATTCTTCATATTTTGTCCAATGCAAGGTTTCATTGTGCACTTCATCGTGCAATAGTGAACAACACAAATGAGAGATATTCAGTGGCTTATTTTTATGGACCCCAAGCTGATTATGTTATTTCCCCTTTGGTTCTAAACTCTGATGTGCCATGTTTTCGAGCTTTGACTGTGAAGGACTATTTGAGTATTAAAGCCAAGAATTTTAAGGGAGCATTGTCTTTGATTACCACTACTTGA 1038 0.3931 MSNTFSEAFRNHPLPLNDIIPLDFSSIRTLPESHAWSKSNDNGDHFSFNESLSIPIIDLMDPNAMEQIGHACEKWGAFQLKNHGIPLSVIEDVEVESKHLFSLPAEKKLKALRSSGGATGYGRARISPFFPKYMWHEGFTFMGSSDDAKKIWPKDHAPFCDTMQNYQNQMKVLAEKLTHMILNFMGMNSEEEKKWVGSKNQFEAIQLNYYPCCPEPDRAMGLAPHTDTSFLTILHQTQTNGLQIFQKCLGWVPINPDPNTLVVNIGDILHILSNARFHCALHRAIVNNTNERYSVAYFYGPQADYVISPLVLNSDVPCFRALTVKDYLSIKAKNFKGALSLITTT* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0975 345 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 338 - -
Lan10g0975 345 Gene3D - 18 336 IPR027443 -
Lan10g0975 345 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 201 301 IPR005123 -
Lan10g0975 345 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 153 IPR026992 -
Lan10g0975 345 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 13 338 - -
Lan10g0975 345 Pfam 2OG-Fe(II) oxygenase superfamily 203 301 IPR044861 -
Lan10g0975 345 SUPERFAMILY Clavaminate synthase-like 18 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0975 Lan-Chr10 14778737 14781581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0975 52 327 Glycosyltransferase AT5G59530 30.565 3.29e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0975 K04124 - gmx:100808546 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0975 10 14778737 14781581 Lan6g1765 6 28884208 28887169 LSH