Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1763 ATGCTCAAAACTTTTCTTAACAAGCTTTCTCGGAAATCAAAACTTGATTCTGAAGGTGATTCCTCACGTTCCACCGCCTCTCCACGCGGTGTTTCCGGAAGAAGCCACCGTCAGCACGGTGGTGGTGGCGGTGGTTCTTCTGCCGCTGCGAAACGAGCTTCGGCGTCTGCAGTTTTTCCGGCGAGCATGGTGTCTGGGATTGAACCTTTGGTGCCATTCAATGATGTTCCAAATTCTGAAAAGATGAACCTTTTTGTAAGCAAATTGAGCCTTTGTTGTGTTACCTTTGATTTTTCTGATCCTGGTAAGAATATTGTGGAGAAAGATTTGAAAAGGAGAACATTGTTTGAACTTGTTGATTTTGTATCTTGTGGTGGTTCAATGAAATTTAGTGAACATGCTATCCTTGCAATGTGTAAAATGTTTGCTATTAATCTATTTCGAGTTTTTCCGCCGAATTATAGAGCTAATGGAGGTGTTAGTGAGAATGATGATGATGAGCTTATGTTTGATCCTGCTTGGCCACATTTACAAATTGTGTATGAATTGATGGTTACATTTATATCGTCTTCGTGCCTTGATGCTAAGGTAGCGAAGAAGTATATCGATCATTCATTTATCTCGAAGTTGCTTGATTTGTTTGAATCCGATGATCCTAGAGAAAGAGACTGCTTGAAGACAATTCTGCATAGGGTTTATGGGAAGTTCATGGTGCATAGACCCTTTATTCGAAAATCGATGAGCAATATATTTTATCAGTTCGTGTTCGAGACTGAGAAACACAATGGGATTGCTGAGTTGTTGGAGGTTTTTGGGAGTGTGATTAGTGGGTTTGCTTTGCCTTTGAAAGAGGAACACAAGATATTCTTGTGGAGAGTTTTGATCCCATTGCACAAGCCGAAATCTATGGATCTCTACTTTCAACCATTGTCTTACTGTATTACACTGTTTATAGAGAAGGAAACCAAGTTAGCAAGCATTGTGATAAATGGTTTGTTAAAATATTGGCCCGTGACCAATAGTCAGAAAGAGGTGATGTTTCTTGGTGAACTGGAAGAAATTTTGGACGTAATTAACATGGTTGAGTTCCAGAGGGTCATGGTCCCATTGTTTTTGCGGATTGGATGCTGTATTAACAGCTTGCACTTTCAGGTAGCAGAAAGAGCCCTTTACTTATGGAACAATGACCACATCGTCAACTTGATTGCTCATAATCGGCAAGTGATCCTGCCCATCATATTTCCTGCTCTGGATAGCAATGTTCATAGCCACTGGAACCCGGCTGTTATGAACCTAACTCACAATGTCAGAAAGATGTTCTTGGAGATAGACGAGAAACTCTACATTTCTTGTCATTCTCACTTTAAGGAGGATGAAGCAATTCTAAGCGCGGAAGCTGAGAAGCGGAAGGAAGCATGGAAACAACTAGAGCGTGCAGCTAGTCTCAAGCCCGTAACAGGAAATACTGCTGTTCTAGTGTCTCCCTTAATGACCTGA 1497 0.4122 MLKTFLNKLSRKSKLDSEGDSSRSTASPRGVSGRSHRQHGGGGGGSSAAAKRASASAVFPASMVSGIEPLVPFNDVPNSEKMNLFVSKLSLCCVTFDFSDPGKNIVEKDLKRRTLFELVDFVSCGGSMKFSEHAILAMCKMFAINLFRVFPPNYRANGGVSENDDDELMFDPAWPHLQIVYELMVTFISSSCLDAKVAKKYIDHSFISKLLDLFESDDPRERDCLKTILHRVYGKFMVHRPFIRKSMSNIFYQFVFETEKHNGIAELLEVFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSMDLYFQPLSYCITLFIEKETKLASIVINGLLKYWPVTNSQKEVMFLGELEEILDVINMVEFQRVMVPLFLRIGCCINSLHFQVAERALYLWNNDHIVNLIAHNRQVILPIIFPALDSNVHSHWNPAVMNLTHNVRKMFLEIDEKLYISCHSHFKEDEAILSAEAEKRKEAWKQLERAASLKPVTGNTAVLVSPLMT* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1763 498 PIRSF PP2A_B56 6 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan6g1763 498 SUPERFAMILY ARM repeat 83 476 IPR016024 -
Lan6g1763 498 Gene3D - 77 479 IPR011989 -
Lan6g1763 498 MobiDBLite consensus disorder prediction 1 49 - -
Lan6g1763 498 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan6g1763 498 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 494 - -
Lan6g1763 498 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1763 Lan-Chr6 28872434 28875434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1763 K11584 - gmx:100781390 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1763 6 28872434 28875434 Lan15g1008 15 19252592 19255667 PCT
Lan6g1763 6 28872434 28875434 Lan14g0791 14 14798235 14800589 PCT
Lan15g1008 15 19252592 19255667 Lan6g1763 6 28872434 28875434 PCT
Lan14g0791 14 14798235 14800589 Lan6g1763 6 28872434 28875434 PCT